CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_010708
(
Theobroma cacao
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
TCM_010708
T201606_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY00792
GRAS
129
499
LVQQLIACAEAVAYRVKIYASALLSELRANALVFGTSFQRVASCFVQGLADRLALVQPQRAVGVVGAVAKAKAVTFEKDEALSLVYELCPQIKFGHFVANASILEAFEGESFVHVVDLGMTLGLLRGHQWCHLMQSLVHRAGQPPKRLRITAVGTCCERLQAIGDDLEHYAKSLKLNFEFSVVECNLENLKPEDFNTSGDEALVINSILQLHCVVKESRGALNSVLQKLRELSPKLLILVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAKMEQFYFAEEIKNIVSCEGPDRIERHERVDQWRRRMSRAGFQPAPVKMIMQAKQWLEKIKVCEGNTIVEDKGCLVLGWKSKPIIAASCWK
Links
Other
GRAS
family TFs
Other
Theobroma cacao
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10013209m.g
Citrus clementina
Ciclev10013209m.g
N
evm.TU.supercontig_14.15
Carica papaya
evm.TU.supercontig_14.15
N
gene28320-v1.0-hybrid
Fragaria vesca
gene28320-v1.0-hybrid
N
GLYMA04G34080
Glycine max
GLYMA04G34080
N
GLYMA06G20400
Glycine max
GLYMA06G20400
N
GLYMA13G05280
Glycine max
GLYMA13G05280
N
GLYMA19G02510
Glycine max
GLYMA19G02510
N
Gorai.001G256200
Gossypium raimondii
Gorai.001G256200
N
Gorai.006G021800
Gossypium raimondii
Gorai.006G021800
N
MDP0000320691
Malus domestica
MDP0000320691
N
MDP0000799392
Malus domestica
MDP0000799392
N
Pm015864
Prunus mume
Pm015864
N
PRUPE_ppa014004mg
Prunus persica
PRUPE_ppa014004mg
N
TCM_018476
Theobroma cacao
TCM_018476
N