CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.006G021800
(
Gossypium raimondii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Gorai.006G021800
T049982_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.006G021800.1
bHLH
19
60
DQIIELVSKLRQLLPEIRDRRSDKVSASKVLQETCNYIRSLH
Gorai.006G021800.2
bHLH
19
60
DQIIELVSKLRQLLPEIRDRRSDKVSASKVLQETCNYIRSLH
Links
Other
bHLH
family TFs
Other
Gossypium raimondii
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_018476
Theobroma cacao
TCM_018476
N
0.914
Ciclev10013209m.g
Citrus clementina
Ciclev10013209m.g
N
0.914
evm.TU.supercontig_14.15
Carica papaya
evm.TU.supercontig_14.15
N
0.914
PRUPE_ppa014004mg
Prunus persica
PRUPE_ppa014004mg
N
0.912
Pm015864
Prunus mume
Pm015864
N
0.912
gene28320-v1.0-hybrid
Fragaria vesca
gene28320-v1.0-hybrid
N
0.912
MDP0000799392
Malus domestica
MDP0000799392
N
0.899
GLYMA04G34080
Glycine max
GLYMA04G34080
N
0.894
GLYMA06G20400
Glycine max
GLYMA06G20400
N
0.894
GLYMA13G05280
Glycine max
GLYMA13G05280
N
0.892
GLYMA19G02510
Glycine max
GLYMA19G02510
N
0.892
MDP0000320691
Malus domestica
MDP0000320691
N
0.887
VIT_14s0108g00420
Vitis vinifera
VIT_14s0108g00420
N
0.871
MTR_6g011670
Medicago truncatula
MTR_6g011670
N
0.869
Gorai.001G256200
Gossypium raimondii
Gorai.001G256200
N
0.855
SapurV1A.1252s0010
Salix purpurea
SapurV1A.1252s0010
N
0.851
LjSGA_010689.2
Lotus japonicus
LjSGA_010689.2
N
0.851
29736.m002007
Ricinus communis
29736.m002007
N
0.849
Eucgr.B03420
Eucalyptus grandis
Eucgr.B03420
N
0.849
Eucgr.J01215
Eucalyptus grandis
Eucgr.J01215
N
0.845
PGSC0003DMG400006893
Solanum tuberosum
PGSC0003DMG400006893
N
0.838
Solyc02g067380.2
Solanum lycopersicum
Solyc02g067380.2
N
0.838