CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_09s0002g01190
(
Vitis vinifera
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
VIT_09s0002g01190
T201834_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_09s0002g01190.t01
GRAS
161
536
AEQLLNPCATAITAGNLSRVQHLLYVLHELASSTGDANHRLADHGLRALSHHLSSSVSVGPITFSSTEPRFFQRSLLKFYEVSPWFAFPNNIANTSILQILNGVPSRSRNLHILDIGVSHGVQWPTLLEALSRRSGGPPPLVRLTVIAATSDNDQNTETPFSIAPPGDNFSARLLSFAKSMNINLQINRLDNHPLQSLSPQLIDTSPDETLIVCAQFRLHHLNHNTPDERTEFLKVLRKLEPEAVILSENNMDCSCTNCGDFATGFSRRIEYLWKFLDSTSAAFKGRESEERRVMEGEAARALTNPGEMNEGKEKWCERMRGVGFAGEVFGEDAIDGARALLKKYDSNWEMRVEEKDGCVGLWWKGLPVSFCSLWR
Links
Other
GRAS
family TFs
Other
Vitis vinifera
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava2753.m1
Manihot esculenta
cassava2753.m1
N
0.795
cassava34800.m1
Manihot esculenta
cassava34800.m1
N
0.828
chr5.CM0569.130.nd
Lotus japonicus
chr5.CM0569.130.nd
N
0.737
evm.TU.supercontig_25.124
Carica papaya
evm.TU.supercontig_25.124
N
0.755
gene25548-v1.0-hybrid
Fragaria vesca
gene25548-v1.0-hybrid
N
0.790
GLYMA07G04430
Glycine max
GLYMA07G04430
N
0.765
GLYMA16G01020
Glycine max
GLYMA16G01020
N
0.746
Gorai.011G058900
Gossypium raimondii
Gorai.011G058900
N
0.833
MDP0000308434
Malus domestica
MDP0000308434
N
0.785
MTR_8g020840
Medicago truncatula
MTR_8g020840
N
0.742
orange1.1g008559m.g
Citrus sinensis
orange1.1g008559m.g
N
0.815
PK20670.1
Cannabis sativa
PK20670.1
N
0.774
Pm013263
Prunus mume
Pm013263
N
0.799
POPTR_0001s16890
Populus trichocarpa
POPTR_0001s16890
N
0.824
POPTR_0003s06380
Populus trichocarpa
POPTR_0003s06380
N
0.807
PRUPE_ppa022653mg
Prunus persica
PRUPE_ppa022653mg
N
0.804
SapurV1A.0002s0940
Salix purpurea
SapurV1A.0002s0940
N
0.804
TCM_029136
Theobroma cacao
TCM_029136
N
0.852