CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SapurV1A.0002s0940
(
Salix purpurea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
SapurV1A.0002s0940
T203104_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0002s0940.1.p
GRAS
170
550
AEQLLNPCAAAITSGNLSRVQHLLYVLHELASPTGDANHRLAAHGLRALTHHVSSSSTSSSASIGTLTFASTEPKFFQKALLKFYEVSPWFAFPNNIANASILQVLAQEQDPTRNLHILDIGVSHGVQWPTLLEALTRRPGGPPPLVRITVITATTENDQSTAPPFSVGPPGDNFSSRLLGFAKFMNINLEIKRLDGYPLQKLNGRIIDAKPEEALIVCAQFRLHNLNHNTPDERNEFLRVLRKLEPKGVILSENNMDCSCNGCGDFAAGFSRRVDYLWRFLDSTSSAFKGRESEERRMMEGEGSKALTNRGEMNEGKDKWCERMEGAGFEGEMFGEDAIDGARALLRKYDSNWEMRTEGKDECVGLWWKGQPVSFCSLWK
Links
Other
GRAS
family TFs
Other
Salix purpurea
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0003s06380
Populus trichocarpa
POPTR_0003s06380
N
0.937
POPTR_0001s16890
Populus trichocarpa
POPTR_0001s16890
N
0.887
TCM_029136
Theobroma cacao
TCM_029136
N
0.822
cassava34800.m1
Manihot esculenta
cassava34800.m1
N
0.820
cassava2753.m1
Manihot esculenta
cassava2753.m1
N
0.809
Gorai.011G058900
Gossypium raimondii
Gorai.011G058900
N
0.808
VIT_09s0002g01190
Vitis vinifera
VIT_09s0002g01190
N
0.804
Pm013263
Prunus mume
Pm013263
N
0.802
PRUPE_ppa022653mg
Prunus persica
PRUPE_ppa022653mg
N
0.796
orange1.1g008559m.g
Citrus sinensis
orange1.1g008559m.g
N
0.796
Lus10022097.g
Linum usitatissimum
Lus10022097.g
N
0.786
Lus10000532.g
Linum usitatissimum
Lus10000532.g
N
0.781
MDP0000308434
Malus domestica
MDP0000308434
N
0.771
gene25548-v1.0-hybrid
Fragaria vesca
gene25548-v1.0-hybrid
N
0.766
GLYMA07G04430
Glycine max
GLYMA07G04430
N
0.762
PK20670.1
Cannabis sativa
PK20670.1
N
0.758
29706.m001281
Ricinus communis
29706.m001281
N
0.756
GLYMA16G01020
Glycine max
GLYMA16G01020
N
0.754
evm.TU.supercontig_25.124
Carica papaya
evm.TU.supercontig_25.124
N
0.752
Ca_10004
Cicer arietinum
Ca_10004
N
0.751
Ciclev10027413m.g
Citrus clementina
Ciclev10027413m.g
N
0.751
MTR_8g020840
Medicago truncatula
MTR_8g020840
N
0.748
chr5.CM0569.130.nd
Lotus japonicus
chr5.CM0569.130.nd
N
0.727
Solyc03g123400.1
Solanum lycopersicum
Solyc03g123400.1
N
0.725
PGSC0003DMG400039263
Solanum tuberosum
PGSC0003DMG400039263
N
0.719
Cucsa.360250
Cucumis sativus
Cucsa.360250
N
0.703