CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10000532.g
(
Linum usitatissimum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Lus10000532.g
T202678_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10000532
GRAS
1
196
MNINLQINRLDNRSLQNLNTQVINKDREETLVVCAQFRLHHLNHNNPDERSEFLRVLRSLEPKGVILSENNMDCSCNGCVDYSSGFTRRVEYLWRFLDSTSSAFKGRESEERRMMEGEAAKALTNSGEMNERKEQWCERMRGVGFSGEGFCEDAIDEARALLRKHDNNWEMRVEEKDGFVGLWWKGQPVSFCSLWK
Links
Other
GRAS
family TFs
Other
Linum usitatissimum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10022097.g
Linum usitatissimum
Lus10022097.g
N
0.984
cassava34800.m1
Manihot esculenta
cassava34800.m1
N
0.797
Gorai.011G058900
Gossypium raimondii
Gorai.011G058900
N
0.797
cassava2753.m1
Manihot esculenta
cassava2753.m1
N
0.792
PRUPE_ppa022653mg
Prunus persica
PRUPE_ppa022653mg
N
0.786
VIT_09s0002g01190
Vitis vinifera
VIT_09s0002g01190
N
0.786
SapurV1A.0002s0940
Salix purpurea
SapurV1A.0002s0940
N
0.781
POPTR_0003s06380
Populus trichocarpa
POPTR_0003s06380
N
0.771
Pm013263
Prunus mume
Pm013263
N
0.771
MDP0000308434
Malus domestica
MDP0000308434
N
0.766
gene25548-v1.0-hybrid
Fragaria vesca
gene25548-v1.0-hybrid
N
0.755
GLYMA16G01020
Glycine max
GLYMA16G01020
N
0.729
MTR_8g020840
Medicago truncatula
MTR_8g020840
N
0.729
GLYMA07G04430
Glycine max
GLYMA07G04430
N
0.714
evm.TU.supercontig_25.124
Carica papaya
evm.TU.supercontig_25.124
N
0.708
chr5.CM0569.130.nd
Lotus japonicus
chr5.CM0569.130.nd
N
0.708