CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_16293
(
Cicer arietinum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ca_16293
T201888_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_16293
GRAS
290
658
LWTLLTQCAQAVGGYDQSNANEILKQIRQHSSPHGDGLQRLAHYFANGLEARLFAGTPMYKLLSSASSADMLKAYKVYITASPFQRMSNFLANRTILKLAQNKSSLHIIDFGVFYGFQWPCLIQRLSERAGGPPRLRITGVDLPQPGFRPAERVEETGRRLEKYCKRFGVPFEYNCLAQKWDTIRLEDLKIDREEVTVVNCLYRLKNLSDETVTANCPRDAVLGLIRRINPNIFIHGVVNGTYNAPFFLTRFREALFHFSSLFDMLEATVPREDPYRLMFEKGLFGRDAVNVVACEGAERVERPETYKQWQVRNKRARFKQVPLEPELVDKVKEMVKKEYSKDFVVDEDGKWVLQGWKGRILHAVSCWV
Links
Other
GRAS
family TFs
Other
Cicer arietinum
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_098180
Albugo laibachii
ALNC14_098180
N
ALNC14_114790
Albugo laibachii
ALNC14_114790
N
estExt_fgenesh1_kg.C_260006
Phytophthora capsici
estExt_fgenesh1_kg.C_260006
N
F443_03220
Phytophthora parasitica
F443_03220
N
F443_03223
Phytophthora parasitica
F443_03223
N
fgenesh1_pg.C_scaffold_26000008
Phytophthora capsici
fgenesh1_pg.C_scaffold_26000008
N
fgenesh_masked-pir_contig_142-abinit-gene-0.47
Pythium irregulare
fgenesh_masked-pir_contig_142-abinit-gene-0.47
N
fgenesh_scip_prom.28083.12017
Phytophthora lateralis
fgenesh_scip_prom.28083.12017
N
fgenesh_scip_prom.28083.12018
Phytophthora lateralis
fgenesh_scip_prom.28083.12018
N
fgenesh_scip_prom.46568.8839
Phytophthora kernoviae
fgenesh_scip_prom.46568.8839
N
HpaG811475
Hyaloperonospora arabidopsidis
HpaG811475
N
maker-par_contig_173-fgenesh-gene-0.4
Pythium arrhenomanes
maker-par_contig_173-fgenesh-gene-0.4
N
maker-pir_contig_142-fgenesh-gene-0.5
Pythium irregulare
maker-pir_contig_142-fgenesh-gene-0.5
N
maker-piw_contig_3307-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_3307-fgenesh-gene-0.0
N
maker-piw_contig_3307-fgenesh-gene-0.1
Pythium iwayamai
maker-piw_contig_3307-fgenesh-gene-0.1
N
maker-pve_contig_603-fgenesh-gene-0.5
Pythium vexans
maker-pve_contig_603-fgenesh-gene-0.5
N
maker-pve_contig_603-snap-gene-0.9
Pythium vexans
maker-pve_contig_603-snap-gene-0.9
N
Phyra73305
Phytophthora ramorum
Phyra73305
N
Phyra73306
Phytophthora ramorum
Phyra73306
N
Physo131312
Phytophthora sojae
Physo131312
N
Physo131313
Phytophthora sojae
Physo131313
N
PITG_11731
Phytophthora infestans
PITG_11731
N
PITG_19361
Phytophthora infestans
PITG_19361
N
PITG_19362
Phytophthora infestans
PITG_19362
N
PYU1_G003104
Pythium ultimum
PYU1_G003104
N
PYU1_G003105
Pythium ultimum
PYU1_G003105
N