CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_scaffold_26000008
(
Phytophthora capsici
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
fgenesh1_pg.C_scaffold_26000008
T290854_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_26000008
Myb
70
115
KMWTQEEHEKFLEAMEKYPAGPWKVIAAYIGTKTTRQTMTHAQKYR
Links
Other
Myb/SANT
family TFs
Other
Phytophthora capsici
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_03223
Phytophthora parasitica
F443_03223
N
0.891
fgenesh_scip_prom.28083.12017
Phytophthora lateralis
fgenesh_scip_prom.28083.12017
N
0.891
maker-pag1_scaffold_151-fgenesh-gene-0.9
Pythium aphanidermatum
maker-pag1_scaffold_151-fgenesh-gene-0.9
N
0.891
maker-par_contig_173-fgenesh-gene-0.4
Pythium arrhenomanes
maker-par_contig_173-fgenesh-gene-0.4
N
0.891
maker-pve_contig_603-snap-gene-0.9
Pythium vexans
maker-pve_contig_603-snap-gene-0.9
N
0.891
Phyra73306
Phytophthora ramorum
Phyra73306
N
0.891
Physo131313
Phytophthora sojae
Physo131313
N
0.891
PITG_19361
Phytophthora infestans
PITG_19361
N
0.891
fgenesh_scip_prom.46568.8839
Phytophthora kernoviae
fgenesh_scip_prom.46568.8839
N
0.883
ALNC14_098180
Albugo laibachii
ALNC14_098180
N
0.802
ALNC14_114790
Albugo laibachii
ALNC14_114790
N
0.802
fgenesh_masked-pir_contig_142-abinit-gene-0.47
Pythium irregulare
fgenesh_masked-pir_contig_142-abinit-gene-0.47
N
0.794
PYU1_G003105
Pythium ultimum
PYU1_G003105
N
0.794
maker-piw_contig_3307-fgenesh-gene-0.1
Pythium iwayamai
maker-piw_contig_3307-fgenesh-gene-0.1
N
0.755
F443_03220
Phytophthora parasitica
F443_03220
N
0.731
fgenesh_scip_prom.28083.12018
Phytophthora lateralis
fgenesh_scip_prom.28083.12018
N
0.731
HpaG811475
Hyaloperonospora arabidopsidis
HpaG811475
N
0.731
Phyra73305
Phytophthora ramorum
Phyra73305
N
0.731
Physo131312
Phytophthora sojae
Physo131312
N
0.731
estExt_fgenesh1_kg.C_260006
Phytophthora capsici
estExt_fgenesh1_kg.C_260006
N
0.731
maker-pir_contig_142-fgenesh-gene-0.5
Pythium irregulare
maker-pir_contig_142-fgenesh-gene-0.5
N
0.724
maker-piw_contig_3307-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_3307-fgenesh-gene-0.0
N
0.724
maker-pve_contig_603-fgenesh-gene-0.5
Pythium vexans
maker-pve_contig_603-fgenesh-gene-0.5
N
0.724
PYU1_G003104
Pythium ultimum
PYU1_G003104
N
0.724
PITG_11731
Phytophthora infestans
PITG_11731
N
0.720
PITG_19362
Phytophthora infestans
PITG_19362
N
0.720