CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava31043.valid.m1
(
Manihot esculenta
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
cassava31043.valid.m1
T202079_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava31043.valid.m1
GRAS
45
466
LIHLLLTCANHVASGNLENAEIALGQISQLASADGDTMQRIAAYFTEALAQRIIKALPGVHRALNATRITLVSEEILVRKLFFEMLPFLKVAFLLANQAIIEAMEGEKMVHIIDLNAAEPAQWLALLQALSARPEGPPHLRITGIHQQKWVLDQMAHKLIEEAERLDIPFQFNPIAGDLENLDIEKLRVKTGEALAISSILQLHPFLASDDELRRRSPVPLKNSNGIHLLRALQMHQGTLGELLEKDMVNGYNPSPESTSSSPQSPSTSVKMDYFLNMLWSLSPKLMVVMEQDSNHNGSTLMERLLESLYSYAALFDCLESTVSRTSMERLKMEKMLYGEEIKNIVACEGAERRERHEKLEKWMQRLDLAGFGNVHLSYYGMLQARRLLQGYGCDGYRIKEENGCVVICWQDRPLFSVSAWR
Links
Other
GRAS
family TFs
Other
Manihot esculenta
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF555
Bos taurus
ENSBTAG00000008397
I
ZNF555
Canis familiaris
ENSCAFG00000031385
I
ZNF555
Callithrix jacchus
ENSCJAG00000003485
I
ENSCSAG00000011462
Chlorocebus sabaeus
ENSCSAG00000011462
I
ZNF555
Felis catus
ENSFCAG00000022276
I
ZNF555
Homo sapiens
ENSG00000186300
D
ZNF555
Gorilla gorilla
ENSGGOG00000001761
I
ZNF555
Microcebus murinus
ENSMICG00000001516
I
ZNF555
Macaca mulatta
ENSMMUG00000007485
I
ENSMPUG00000006605
Mustela putorius furo
ENSMPUG00000006605
I
ENSOARG00000013428
Ovis aries
ENSOARG00000013428
I
ZNF555
Otolemur garnettii
ENSOGAG00000000383
I
ENSP00000334853
Macaca fascicularis
ENSP00000334853
I
ZNF555
Pan troglodytes
ENSPTRG00000010246
I