cassava31043.valid.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava31043.valid.m1 T202079_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava31043.valid.m1 GRAS 45 466

Links

Other GRAS family TFs
Other Manihot esculenta TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.886
30024.m001746 Ricinus communis 30024.m001746 N 0.877
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.849
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.845
TCM_040833 Theobroma cacao TCM_040833 N 0.845
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.838
Pm012190 Prunus mume Pm012190 N 0.831
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.831
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.809
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.802
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.798
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.796
Ca_27441 Cicer arietinum Ca_27441 N 0.796
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.793
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.790
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.790
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.779
Ca_11133 Cicer arietinum Ca_11133 N 0.779
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.777
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.766
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.766
Cla006433 Citrullus lanatus Cla006433 N 0.763
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.763
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.763
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.760
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.759
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.758
SCL3 Arabidopsis thaliana AT1G50420 N 0.757
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.757
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.757
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.755
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.752
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.749
Bra014251 Brassica rapa Bra014251 N 0.748
Bo3g179450 Brassica oleracea Bo3g179450 N 0.747
30131.m007244 Ricinus communis 30131.m007244 N 0.747
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.747
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.747
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.747
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.744
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.744
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.736
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.736
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.730
Bra018848 Brassica rapa Bra018848 N 0.730
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.730
Bo6g022200 Brassica oleracea Bo6g022200 N 0.730
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.728
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.728
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.728
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.725
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.725
mgf022906m Mimulus guttatus mgf022906m N 0.725
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.725
TCM_042392 Theobroma cacao TCM_042392 N 0.722
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.719
Pm029840 Prunus mume Pm029840 N 0.717
GLYMA01G43620 Glycine max GLYMA01G43620 N 0.717
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.717
Pm016466 Prunus mume Pm016466 N 0.717
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.708
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.706
GLYMA11G01850 Glycine max GLYMA11G01850 N 0.704
mgf008315m Mimulus guttatus mgf008315m N 0.703