SCL3 (Arabidopsis lyrata)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 fgenesh2_kg.1__4122__AT1G50420.1 T200119_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__4122__AT1G50420.1 GRAS 54 478

Links

Other GRAS family TFs
Other Arabidopsis lyrata TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SCL3 Arabidopsis thaliana AT1G50420 N 0.981
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.976
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.973
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.967
Bra014251 Brassica rapa Bra014251 N 0.932
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.930
Bo3g179450 Brassica oleracea Bo3g179450 N 0.924
Bo5g078760 Brassica oleracea Bo5g078760 N 0.919
Bra018848 Brassica rapa Bra018848 N 0.902
Bo6g022200 Brassica oleracea Bo6g022200 N 0.897
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.786
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.775
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.772
TCM_040833 Theobroma cacao TCM_040833 N 0.770
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.766
chr1.CM0794.360.nd Lotus japonicus chr1.CM0794.360.nd N 0.764
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.763
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.756
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.756
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.755
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.753
Pm012190 Prunus mume Pm012190 N 0.752
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.749
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.742
30024.m001746 Ricinus communis 30024.m001746 N 0.742
Cla006433 Citrullus lanatus Cla006433 N 0.741
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.740
Ca_11133 Cicer arietinum Ca_11133 N 0.737
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.737
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.734
Ca_27441 Cicer arietinum Ca_27441 N 0.732
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.728
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.725
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.725
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.724
30131.m007244 Ricinus communis 30131.m007244 N 0.722
TCM_042392 Theobroma cacao TCM_042392 N 0.719
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.718
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.716
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.716
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.714
PDK_20s1303935g001 Phoenix dactylifera PDK_20s1303935g001 N 0.714
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.713
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N 0.713
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.711
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.710
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.707
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.706
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.705
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.705
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.703
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.703
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.702
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.701
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.700