orange1.1g014413m.g (Citrus sinensis)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 orange1.1g014413m.g T202939_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g014413m GRAS 24 422

Links

Other GRAS family TFs
Other Citrus sinensis TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.997
TCM_040833 Theobroma cacao TCM_040833 N 0.860
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.847
Pm012190 Prunus mume Pm012190 N 0.837
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.835
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.824
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.822
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.821
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.818
Ca_27441 Cicer arietinum Ca_27441 N 0.815
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.813
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.813
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.810
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.810
Ca_11133 Cicer arietinum Ca_11133 N 0.810
30024.m001746 Ricinus communis 30024.m001746 N 0.805
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.804
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.802
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.797
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.796
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.793
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.792
Cla006433 Citrullus lanatus Cla006433 N 0.788
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.785
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.780
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.780
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.774
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.769
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.769
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.769
SCL3 Arabidopsis thaliana AT1G50420 N 0.766
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.766
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.766
30131.m007244 Ricinus communis 30131.m007244 N 0.766
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.766
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.766
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.765
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.763
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.763
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.763
Bra018848 Brassica rapa Bra018848 N 0.760
TCM_042392 Theobroma cacao TCM_042392 N 0.760
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.760
Bo5g078760 Brassica oleracea Bo5g078760 N 0.758
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.758
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.756
Bo3g179450 Brassica oleracea Bo3g179450 N 0.755
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.755
Pm016466 Prunus mume Pm016466 N 0.755
Pm029840 Prunus mume Pm029840 N 0.755
mgf022906m Mimulus guttatus mgf022906m N 0.755
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.755
Bra014251 Brassica rapa Bra014251 N 0.753
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.752
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.752
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.749
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.747
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.747
GLYMA01G43620 Glycine max GLYMA01G43620 N 0.741
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.738
Bo6g022200 Brassica oleracea Bo6g022200 N 0.737
Cla020893 Citrullus lanatus Cla020893 N 0.736
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.736
Cucsa.308180 Cucumis sativus Cucsa.308180 N 0.736
GLYMA11G01850 Glycine max GLYMA11G01850 N 0.729
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.725
PK02707.1 Cannabis sativa PK02707.1 N 0.719
mgf008315m Mimulus guttatus mgf008315m N 0.717
Lus10039562.g Linum usitatissimum Lus10039562.g N 0.716
Lus10024177.g Linum usitatissimum Lus10024177.g N 0.711
gene14438-v1.0-hybrid Fragaria vesca gene14438-v1.0-hybrid N 0.700