Pm012190 (Prunus mume)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pm012190 T201965_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm012190 GRAS 46 468

Links

Other GRAS family TFs
Other Prunus mume TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.997
TCM_040833 Theobroma cacao TCM_040833 N 0.869
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.847
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.837
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.837
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.835
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.834
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.831
Ca_27441 Cicer arietinum Ca_27441 N 0.830
30024.m001746 Ricinus communis 30024.m001746 N 0.830
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.822
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.819
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.817
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.817
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.817
Ca_11133 Cicer arietinum Ca_11133 N 0.810
Cla006433 Citrullus lanatus Cla006433 N 0.809
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.808
chr1.CM0794.360.nd Lotus japonicus chr1.CM0794.360.nd N 0.802
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.798
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.791
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.791
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.791
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.790
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.790
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.789
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.787
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.786
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.785
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.781
30131.m007244 Ricinus communis 30131.m007244 N 0.779
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.779
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N 0.775
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.774
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.774
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.771
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.771
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.771
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.771
TCM_042392 Theobroma cacao TCM_042392 N 0.768
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.766
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.763
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.763
SCL3 Arabidopsis thaliana AT1G50420 N 0.760
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.760
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.757
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.757
Bra014251 Brassica rapa Bra014251 N 0.756
GLYMA01G43620 Glycine max GLYMA01G43620 N 0.755
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.755
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.755
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.753
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.752
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.752
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.752
Bo5g078760 Brassica oleracea Bo5g078760 N 0.750
Bo3g179450 Brassica oleracea Bo3g179450 N 0.749
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.749
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.747
GLYMA11G01850 Glycine max GLYMA11G01850 N 0.745
Bra018848 Brassica rapa Bra018848 N 0.744
PK02707.1 Cannabis sativa PK02707.1 N 0.744
Cucsa.308180 Cucumis sativus Cucsa.308180 N 0.738
mgf022906m Mimulus guttatus mgf022906m N 0.738
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.736
Pm016466 Prunus mume Pm016466 N 0.736
Pm029840 Prunus mume Pm029840 N 0.736
Bo6g022200 Brassica oleracea Bo6g022200 N 0.729
Cla020893 Citrullus lanatus Cla020893 N 0.725
mgf008315m Mimulus guttatus mgf008315m N 0.725
gene14438-v1.0-hybrid Fragaria vesca gene14438-v1.0-hybrid N 0.719