TCM_042392 (Theobroma cacao)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 TCM_042392 T201639_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY17606 GRAS 48 478
EOY17607 GRAS 45 475

Links

Other GRAS family TFs
Other Theobroma cacao TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.935
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.916
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.873
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.864
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.864
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.853
30131.m007244 Ricinus communis 30131.m007244 N 0.848
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.848
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.848
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.837
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.834
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.834
PK02707.1 Cannabis sativa PK02707.1 N 0.826
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.822
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.820
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.815
Pm016466 Prunus mume Pm016466 N 0.815
Pm029840 Prunus mume Pm029840 N 0.815
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N 0.813
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.807
TCM_040833 Theobroma cacao TCM_040833 N 0.806
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.803
Lus10024177.g Linum usitatissimum Lus10024177.g N 0.801
Lus10039562.g Linum usitatissimum Lus10039562.g N 0.801
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.798
Cucsa.308180 Cucumis sativus Cucsa.308180 N 0.791
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.790
gene14438-v1.0-hybrid Fragaria vesca gene14438-v1.0-hybrid N 0.790
Cla020893 Citrullus lanatus Cla020893 N 0.785
Pm012190 Prunus mume Pm012190 N 0.768
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.766
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.763
Lus10019773.g Linum usitatissimum Lus10019773.g N 0.763
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.762
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.760
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.760
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.760
30024.m001746 Ricinus communis 30024.m001746 N 0.759
Ca_27441 Cicer arietinum Ca_27441 N 0.756
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.751
Ca_11133 Cicer arietinum Ca_11133 N 0.746
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.742
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.741
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.740
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.740
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.734
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.734
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.726
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.722
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.722
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.722
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.719
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.719
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.719
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.717
SCL3 Arabidopsis thaliana AT1G50420 N 0.715
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.715
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.714
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.711
Cla006433 Citrullus lanatus Cla006433 N 0.711
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.706
Bra014251 Brassica rapa Bra014251 N 0.705
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.705
mgf008315m Mimulus guttatus mgf008315m N 0.703
Bo5g078760 Brassica oleracea Bo5g078760 N 0.702
mgf022906m Mimulus guttatus mgf022906m N 0.700