30024.m001746 (Ricinus communis)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 30024.m001746 T202027_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
30024.m001746 GRAS 27 448

Links

Other GRAS family TFs
Other Ricinus communis TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.890
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.877
TCM_040833 Theobroma cacao TCM_040833 N 0.863
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.860
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.860
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.847
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.830
Pm012190 Prunus mume Pm012190 N 0.830
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.830
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.816
Ca_27441 Cicer arietinum Ca_27441 N 0.811
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.810
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.805
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.805
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.803
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.800
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.792
Ca_11133 Cicer arietinum Ca_11133 N 0.788
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.781
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.775
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.775
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.773
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.773
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.773
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.773
30131.m007244 Ricinus communis 30131.m007244 N 0.767
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.764
Cla006433 Citrullus lanatus Cla006433 N 0.764
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.762
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.762
TCM_042392 Theobroma cacao TCM_042392 N 0.759
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.756
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.756
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.755
SCL3 Arabidopsis thaliana AT1G50420 N 0.753
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.753
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.753
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.751
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.751
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.751
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.749
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.748
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.748
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.748
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.747
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.745
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.744
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.742
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.742
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.742
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.737
Bo3g179450 Brassica oleracea Bo3g179450 N 0.734
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.734
Bra018848 Brassica rapa Bra018848 N 0.732
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.732
Pm016466 Prunus mume Pm016466 N 0.732
Pm029840 Prunus mume Pm029840 N 0.732
Bra014251 Brassica rapa Bra014251 N 0.729
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.729
Bo6g022200 Brassica oleracea Bo6g022200 N 0.726
GLYMA01G43620 Glycine max GLYMA01G43620 N 0.715
Lus10024177.g Linum usitatissimum Lus10024177.g N 0.715
Lus10039562.g Linum usitatissimum Lus10039562.g N 0.715
PK02707.1 Cannabis sativa PK02707.1 N 0.715
GLYMA11G01850 Glycine max GLYMA11G01850 N 0.712
mgf022906m Mimulus guttatus mgf022906m N 0.712
mgf008315m Mimulus guttatus mgf008315m N 0.710
gene14438-v1.0-hybrid Fragaria vesca gene14438-v1.0-hybrid N 0.703