CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf022906m
(
Mimulus guttatus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
mgf022906m
T202219_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf022906m
GRAS
46
462
LIHLLVTCANHVASGSLENANIALDQISHLASSEGDTMQRIASYFSEALADRILRTWPGVYKAFHSTRIPDLAEETLVRKMFFDFLLFTKVAFVISNQVIVEAMEGERIVHVIDLNASEPAQWCALIRDLSARPEGPPHLRITGIHQQKEVLENMAHVLTEEAEKLDLPFQFNPIVTKLENLDFDKLRVKTGEALAISSIMQLHTLLAPDSSINKSPSTPMNNGLSIHLQRVAHMNQSTLRELLEKDVLVNDYSPSNDSASSSNIESFLGALWGLSPKVMVVTEQDSDHNGKNLMERLSEALYFYAALFDCLESALPRVSVERLKMEKMLLGEEIKNIIACEGVERRERHEKLEKWRRRFELCGFTNVPLSYYGMLQANRLMQSCSNSGDGYRIREESGNVVICWQDRPLFSVSAWR
Links
Other
GRAS
family TFs
Other
Mimulus guttatus
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
mgf008315m
Mimulus guttatus
mgf008315m
N
0.798
VIT_02s0033g00050
Vitis vinifera
VIT_02s0033g00050
N
0.765
Solyc12g099900.1
Solanum lycopersicum
Solyc12g099900.1
N
0.762
PGSC0003DMG400004649
Solanum tuberosum
PGSC0003DMG400004649
N
0.759
orange1.1g014413m.g
Citrus sinensis
orange1.1g014413m.g
N
0.755
Ciclev10015219m.g
Citrus clementina
Ciclev10015219m.g
N
0.752
LjSGA_017153.1
Lotus japonicus
LjSGA_017153.1
N
0.752
TCM_040833
Theobroma cacao
TCM_040833
N
0.746
PGSC0003DMG400022709
Solanum tuberosum
PGSC0003DMG400022709
N
0.745
MTR_5g009080
Medicago truncatula
MTR_5g009080
N
0.742
Ca_27441
Cicer arietinum
Ca_27441
N
0.742
Gorai.006G125700
Gossypium raimondii
Gorai.006G125700
N
0.740
Pm012190
Prunus mume
Pm012190
N
0.738
PRUPE_ppa005243mg
Prunus persica
PRUPE_ppa005243mg
N
0.736
Solyc01g008910.2
Solanum lycopersicum
Solyc01g008910.2
N
0.736
SCL3
Vitis vinifera
VIT_06s0009g02390
N
0.733
chr2.CM0018.90.nc
Lotus japonicus
chr2.CM0018.90.nc
N
0.729
evm.TU.supercontig_84.12
Carica papaya
evm.TU.supercontig_84.12
N
0.726
cassava31043.valid.m1
Manihot esculenta
cassava31043.valid.m1
N
0.725
SCL3
Populus trichocarpa
POPTR_0009s05330
N
0.723
chr3.CM0460.90.nd
Lotus japonicus
chr3.CM0460.90.nd
N
0.721
Ca_11133
Cicer arietinum
Ca_11133
N
0.718
SapurV1A.1723s0080
Salix purpurea
SapurV1A.1723s0080
N
0.718
GLYMA11G10170
Glycine max
GLYMA11G10170
N
0.714
30024.m001746
Ricinus communis
30024.m001746
N
0.712
evm.TU.supercontig_197.7
Carica papaya
evm.TU.supercontig_197.7
N
0.708
Ciclev10031389m.g
Citrus clementina
Ciclev10031389m.g
N
0.707
Aquca_014_00674
Aquilegia coerulea
Aquca_014_00674
N
0.705
cassava13860.valid.m1
Manihot esculenta
cassava13860.valid.m1
N
0.704
orange1.1g011736m.g
Citrus sinensis
orange1.1g011736m.g
N
0.704
VIT_13s0019g01220
Vitis vinifera
VIT_13s0019g01220
N
0.703
GLYMA12G02490
Glycine max
GLYMA12G02490
N
0.702
30131.m007244
Ricinus communis
30131.m007244
N
0.702
Eucgr.B03716
Eucalyptus grandis
Eucgr.B03716
N
0.702
TCM_042392
Theobroma cacao
TCM_042392
N
0.700
Cla006433
Citrullus lanatus
Cla006433
N
0.700