MTR_5g009080 (Medicago truncatula)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 MTR_5g009080 T200557_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AES93930 GRAS 53 478

Links

Other GRAS family TFs
Other Medicago truncatula TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_27441 Cicer arietinum Ca_27441 N 0.945
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.915
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.874
Ca_11133 Cicer arietinum Ca_11133 N 0.855
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.844
chr1.CM0794.360.nd Lotus japonicus chr1.CM0794.360.nd N 0.840
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.833
TCM_040833 Theobroma cacao TCM_040833 N 0.833
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.821
Pm012190 Prunus mume Pm012190 N 0.817
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.815
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.814
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.810
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.808
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.808
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.807
GLYMA01G43620 Glycine max GLYMA01G43620 N 0.803
30024.m001746 Ricinus communis 30024.m001746 N 0.803
GLYMA11G01850 Glycine max GLYMA11G01850 N 0.797
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.796
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.795
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.786
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.784
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.778
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.778
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.770
Cla006433 Citrullus lanatus Cla006433 N 0.767
30131.m007244 Ricinus communis 30131.m007244 N 0.764
TCM_042392 Theobroma cacao TCM_042392 N 0.762
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.762
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.762
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.759
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.759
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.759
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.757
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.756
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.755
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.755
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.753
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.752
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.750
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.749
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.748
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.748
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N 0.746
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.745
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.745
mgf022906m Mimulus guttatus mgf022906m N 0.742
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.741
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.738
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.737
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.734
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.734
SCL3 Arabidopsis thaliana AT1G50420 N 0.732
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.732
Bo5g078760 Brassica oleracea Bo5g078760 N 0.730
Cucsa.308180 Cucumis sativus Cucsa.308180 N 0.730
PK02707.1 Cannabis sativa PK02707.1 N 0.729
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.725
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.724
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.723
Pm016466 Prunus mume Pm016466 N 0.723
Pm029840 Prunus mume Pm029840 N 0.723
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.721
Bra014251 Brassica rapa Bra014251 N 0.718
Bra018848 Brassica rapa Bra018848 N 0.718
Bo3g179450 Brassica oleracea Bo3g179450 N 0.715
Cla020893 Citrullus lanatus Cla020893 N 0.715
Bo6g022200 Brassica oleracea Bo6g022200 N 0.705