chr2.CM0018.90.nc (Lotus japonicus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 chr2.CM0018.90.nc T203272_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr2.CM0018.90.nc GRAS 49 471

Links

Other GRAS family TFs
Other Lotus japonicus TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.915
Ca_27441 Cicer arietinum Ca_27441 N 0.910
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.879
Ca_11133 Cicer arietinum Ca_11133 N 0.860
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.847
TCM_040833 Theobroma cacao TCM_040833 N 0.844
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.841
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.832
GLYMA11G01850 Glycine max GLYMA11G01850 N 0.822
chr1.CM0794.360.nd Lotus japonicus chr1.CM0794.360.nd N 0.821
GLYMA01G43620 Glycine max GLYMA01G43620 N 0.817
Pm012190 Prunus mume Pm012190 N 0.817
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.816
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.815
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.813
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.811
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.811
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.810
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.805
30024.m001746 Ricinus communis 30024.m001746 N 0.805
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.803
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.797
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.797
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.790
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.786
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.778
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.773
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.771
Cla006433 Citrullus lanatus Cla006433 N 0.768
30131.m007244 Ricinus communis 30131.m007244 N 0.766
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.766
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.766
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.766
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.763
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.763
TCM_042392 Theobroma cacao TCM_042392 N 0.760
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.760
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.756
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.754
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.753
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.753
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.751
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.749
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.741
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.741
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.740
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.738
PK02707.1 Cannabis sativa PK02707.1 N 0.737
SCL3 Arabidopsis thaliana AT1G50420 N 0.732
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.732
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.732
Bo5g078760 Brassica oleracea Bo5g078760 N 0.730
Cucsa.308180 Cucumis sativus Cucsa.308180 N 0.730
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.730
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.730
mgf022906m Mimulus guttatus mgf022906m N 0.729
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.729
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.728
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N 0.727
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.724
Bra014251 Brassica rapa Bra014251 N 0.721
Bra018848 Brassica rapa Bra018848 N 0.721
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.721
Pm016466 Prunus mume Pm016466 N 0.721
Pm029840 Prunus mume Pm029840 N 0.721
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.721
Cla020893 Citrullus lanatus Cla020893 N 0.715
Bo3g179450 Brassica oleracea Bo3g179450 N 0.713
Bo6g022200 Brassica oleracea Bo6g022200 N 0.705
mgf008315m Mimulus guttatus mgf008315m N 0.703