Carubv10024938m.g (Capsella rubella)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Carubv10024938m.g T202368_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10024938m GRAS 339 713

Links

Other GRAS family TFs
Other Capsella rubella TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SCL14 Arabidopsis thaliana AT1G07530 N 0.803
SCL33 Arabidopsis thaliana AT2G29060 N 0.946
Bo01118s010 Brassica oleracea Bo01118s010 N 0.803
Bo4g065860 Brassica oleracea Bo4g065860 N 0.864
Bo4g168030 Brassica oleracea Bo4g168030 N 0.830
Bostr.25219s0207 Boechera stricta Bostr.25219s0207 N 0.797
Bostr.27991s0167 Boechera stricta Bostr.27991s0167 N 0.962
Bra028390 Brassica rapa Bra028390 N 0.864
Bra030688 Brassica rapa Bra030688 N 0.805
Bra035653 Brassica rapa Bra035653 N 0.830
Cagra.1671s0373 Capsella grandiflora Cagra.1671s0373 N 0.795
Cagra.3264s0006 Capsella grandiflora Cagra.3264s0006 N 0.995
Carubv10008391m.g Capsella rubella Carubv10008391m.g N 0.795
cassava19450.valid.m1 Manihot esculenta cassava19450.valid.m1 N 0.711
evm.TU.supercontig_81.124 Carica papaya evm.TU.supercontig_81.124 N 0.708
evm.TU.supercontig_81.126 Carica papaya evm.TU.supercontig_81.126 N 0.722
Pm000719 Prunus mume Pm000719 N 0.700
POPTR_0009s03790 Populus trichocarpa POPTR_0009s03790 N 0.711
PRUPE_ppa003149mg Prunus persica PRUPE_ppa003149mg N 0.703
SapurV1A.0040s0470 Salix purpurea SapurV1A.0040s0470 N 0.700
SapurV1A.4599s0010 Salix purpurea SapurV1A.4599s0010 N 0.703
Thhalv10006868m.g Eutrema salsugineum Thhalv10006868m.g N 0.808
Thhalv10016312m.g Eutrema salsugineum Thhalv10016312m.g N 0.892