POPTR_0009s03790 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0009s03790 T201211_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0009s03790.1 GRAS 389 760

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.4599s0010 Salix purpurea SapurV1A.4599s0010 N 0.930
SapurV1A.0040s0470 Salix purpurea SapurV1A.0040s0470 N 0.924
SapurV1A.0041s0160 Salix purpurea SapurV1A.0041s0160 N 0.897
POPTR_0001s24850 Populus trichocarpa POPTR_0001s24850 N 0.884
cassava19450.valid.m1 Manihot esculenta cassava19450.valid.m1 N 0.851
28650.m000191 Ricinus communis 28650.m000191 N 0.843
Pm000719 Prunus mume Pm000719 N 0.816
PRUPE_ppa003149mg Prunus persica PRUPE_ppa003149mg N 0.814
Lus10016521.g Linum usitatissimum Lus10016521.g N 0.792
Lus10040790.g Linum usitatissimum Lus10040790.g N 0.786
evm.TU.supercontig_81.126 Carica papaya evm.TU.supercontig_81.126 N 0.786
evm.TU.supercontig_81.124 Carica papaya evm.TU.supercontig_81.124 N 0.781
TCM_041815 Theobroma cacao TCM_041815 N 0.778
GLYMA12G06670 Glycine max GLYMA12G06670 N 0.773
Ca_16678 Cicer arietinum Ca_16678 N 0.759
GLYMA11G14750 Glycine max GLYMA11G14750 N 0.757
Gorai.003G130600 Gossypium raimondii Gorai.003G130600 N 0.751
VIT_06s0004g04950 Vitis vinifera VIT_06s0004g04950 N 0.749
Thhalv10006868m.g Eutrema salsugineum Thhalv10006868m.g N 0.746
Gorai.001G111500 Gossypium raimondii Gorai.001G111500 N 0.741
MTR_4g064160 Medicago truncatula MTR_4g064160 N 0.741
Bo01118s010 Brassica oleracea Bo01118s010 N 0.738
Ciclev10027848m.g Citrus clementina Ciclev10027848m.g N 0.735
orange1.1g046158m.g Citrus sinensis orange1.1g046158m.g N 0.732
Bra030688 Brassica rapa Bra030688 N 0.732
Cagra.1671s0373 Capsella grandiflora Cagra.1671s0373 N 0.719
SCL14 Arabidopsis thaliana AT1G07530 N 0.719
Carubv10008391m.g Capsella rubella Carubv10008391m.g N 0.719
Bostr.25219s0207 Boechera stricta Bostr.25219s0207 N 0.719
PRUPE_ppa002797mg Prunus persica PRUPE_ppa002797mg N 0.714
Pm027957 Prunus mume Pm027957 N 0.711
Pm000718 Prunus mume Pm000718 N 0.711
Carubv10024938m.g Capsella rubella Carubv10024938m.g N 0.711
Bostr.27991s0167 Boechera stricta Bostr.27991s0167 N 0.711
Cagra.3264s0006 Capsella grandiflora Cagra.3264s0006 N 0.711
Eucgr.J02042 Eucalyptus grandis Eucgr.J02042 N 0.711
SapurV1A.0040s0480 Salix purpurea SapurV1A.0040s0480 N 0.705
TCM_041814 Theobroma cacao TCM_041814 N 0.705
GLYMA13G41240 Glycine max GLYMA13G41240 N 0.705
Eucgr.B02350 Eucalyptus grandis Eucgr.B02350 N 0.703
Thhalv10016312m.g Eutrema salsugineum Thhalv10016312m.g N 0.700
MDP0000247940 Malus domestica MDP0000247940 N 0.700
Eucgr.J02044 Eucalyptus grandis Eucgr.J02044 N 0.700