TCM_041814 (Theobroma cacao)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 TCM_041814 T201636_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY33999 GRAS 411 785
EOY34000 GRAS 411 785
EOY34001 GRAS 411 775
EOY34002 GRAS 411 677

Links

Other GRAS family TFs
Other Theobroma cacao TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.001G111600 Gossypium raimondii Gorai.001G111600 N 0.838
Gorai.003G130500 Gossypium raimondii Gorai.003G130500 N 0.836
POPTR_0009s03800 Populus trichocarpa POPTR_0009s03800 N 0.792
SapurV1A.0040s0480 Salix purpurea SapurV1A.0040s0480 N 0.770
cassava19449.valid.m1 Manihot esculenta cassava19449.valid.m1 N 0.769
SapurV1A.0041s0170 Salix purpurea SapurV1A.0041s0170 N 0.766
POPTR_0001s24860 Populus trichocarpa POPTR_0001s24860 N 0.765
28650.m000190 Ricinus communis 28650.m000190 N 0.759
PRUPE_ppa002797mg Prunus persica PRUPE_ppa002797mg N 0.755
Pm000718 Prunus mume Pm000718 N 0.755
Pm027957 Prunus mume Pm027957 N 0.755
Ciclev10027848m.g Citrus clementina Ciclev10027848m.g N 0.753
orange1.1g046158m.g Citrus sinensis orange1.1g046158m.g N 0.753
evm.TU.supercontig_81.123 Carica papaya evm.TU.supercontig_81.123 N 0.750
VIT_06s0004g04960 Vitis vinifera VIT_06s0004g04960 N 0.728
SapurV1A.4599s0010 Salix purpurea SapurV1A.4599s0010 N 0.728
MDP0000247940 Malus domestica MDP0000247940 N 0.727
SapurV1A.0040s0470 Salix purpurea SapurV1A.0040s0470 N 0.725
PRUPE_ppa003149mg Prunus persica PRUPE_ppa003149mg N 0.717
Pm000719 Prunus mume Pm000719 N 0.717
GLYMA13G41240 Glycine max GLYMA13G41240 N 0.713
Traes_5DL_E275797CE Triticum aestivum Traes_5DL_E275797CE N 0.711
POPTR_0001s24850 Populus trichocarpa POPTR_0001s24850 N 0.709
cassava19450.valid.m1 Manihot esculenta cassava19450.valid.m1 N 0.709
SapurV1A.0041s0160 Salix purpurea SapurV1A.0041s0160 N 0.709
POPTR_0009s03790 Populus trichocarpa POPTR_0009s03790 N 0.705
VIT_06s0004g04950 Vitis vinifera VIT_06s0004g04950 N 0.705
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.700