CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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28650.m000190
(
Ricinus communis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
28650.m000190
T201999_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
28650.m000190
GRAS
438
813
LRSLLILCAQAVSGNDFRTANELVKQIRQHSSPLGDGSQRLAHCFANGLEARLAGSVTGMQSFYTSLASRRRTAADILRAYKTHLHACPFKKLSILFANKMIMHAAEKATTLHIVDFGVSYGFQWPILIQLLSMRDGGPPKLRITGIELPQQGFRPAERIEETGRRLARYCERFNVPFEYNSIAAQNWENIRIEELKINSNEVLAVNCLARFKNLLDEIVEVDCPRNAVLDLIRKIKPNIYVHCIINGSYNAPFFVTRFREALFHFSSLFDMFDSTLSREDQGRMMLENEIYGREAMNVVACEGTERVERPETYKQWQVRITRAGFKQLPLEQEVMEKCRHKLKTWYHKDFVIDEDNNWMLQGWKGRIIYASSCWV
Links
Other
GRAS
family TFs
Other
Ricinus communis
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava19449.valid.m1
Manihot esculenta
cassava19449.valid.m1
N
0.851
POPTR_0001s24860
Populus trichocarpa
POPTR_0001s24860
N
0.799
SapurV1A.0041s0170
Salix purpurea
SapurV1A.0041s0170
N
0.797
POPTR_0009s03800
Populus trichocarpa
POPTR_0009s03800
N
0.791
Ciclev10027848m.g
Citrus clementina
Ciclev10027848m.g
N
0.781
orange1.1g046158m.g
Citrus sinensis
orange1.1g046158m.g
N
0.778
SapurV1A.0040s0480
Salix purpurea
SapurV1A.0040s0480
N
0.775
TCM_041814
Theobroma cacao
TCM_041814
N
0.759
Gorai.001G111600
Gossypium raimondii
Gorai.001G111600
N
0.759
PRUPE_ppa002797mg
Prunus persica
PRUPE_ppa002797mg
N
0.725
Gorai.003G130500
Gossypium raimondii
Gorai.003G130500
N
0.725
Pm000718
Prunus mume
Pm000718
N
0.722
Pm027957
Prunus mume
Pm027957
N
0.722
MDP0000247940
Malus domestica
MDP0000247940
N
0.717
GLYMA13G41240
Glycine max
GLYMA13G41240
N
0.706
PRUPE_ppa003149mg
Prunus persica
PRUPE_ppa003149mg
N
0.703
Lus10004968.g
Linum usitatissimum
Lus10004968.g
N
0.703
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.700