CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0041s0170
(
Salix purpurea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
SapurV1A.0041s0170
T203119_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0041s0170.1.p
GRAS
416
791
LRTLLILCAQAVSANDFRTANELLKQIRQHSSQFGDGTQRLAHFFANGLEARLAGSGDGTRSFFTSLTSKRTTAADMLKAYKTNIQACPFKKLSIFFAISMILQAAEKATTLHIVDFGVLYGFQWPILIQQLSLLPNGPPKLRLTGIELPQQGFRPAERIEETGRRLAKYCERFEVPFEYNPIAAQNWERIPIEDLKINRDEVLAVHCQCRFKNLFDETVEVDCPKNAILKLIREMNPDIFVHTIMNGSYNAPFFLTRFREALFHFSSLFDMFDSTLPREDQARIMFEGELYGRDAMNVVACEGQERVERPETYKQWQVRTARAGFKTLPLDQKLMTKFRGKLKNHYHKDFVIDEDNDWMLQGWKGRIIYASSCWV
Links
Other
GRAS
family TFs
Other
Salix purpurea
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0001s24860
Populus trichocarpa
POPTR_0001s24860
N
0.955
POPTR_0009s03800
Populus trichocarpa
POPTR_0009s03800
N
0.872
SapurV1A.0040s0480
Salix purpurea
SapurV1A.0040s0480
N
0.853
28650.m000190
Ricinus communis
28650.m000190
N
0.797
cassava19449.valid.m1
Manihot esculenta
cassava19449.valid.m1
N
0.793
TCM_041814
Theobroma cacao
TCM_041814
N
0.766
evm.TU.supercontig_81.123
Carica papaya
evm.TU.supercontig_81.123
N
0.764
Ciclev10027848m.g
Citrus clementina
Ciclev10027848m.g
N
0.761
orange1.1g046158m.g
Citrus sinensis
orange1.1g046158m.g
N
0.757
Gorai.001G111600
Gossypium raimondii
Gorai.001G111600
N
0.738
PRUPE_ppa002797mg
Prunus persica
PRUPE_ppa002797mg
N
0.725
Pm000718
Prunus mume
Pm000718
N
0.724
Pm027957
Prunus mume
Pm027957
N
0.724
Gorai.003G130500
Gossypium raimondii
Gorai.003G130500
N
0.717
MDP0000247940
Malus domestica
MDP0000247940
N
0.711
PRUPE_ppa003149mg
Prunus persica
PRUPE_ppa003149mg
N
0.708
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.700