POPTR_0001s24850 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0001s24850 T201164_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s24850.1 GRAS 384 755

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0041s0160 Salix purpurea SapurV1A.0041s0160 N 0.935
SapurV1A.4599s0010 Salix purpurea SapurV1A.4599s0010 N 0.886
POPTR_0009s03790 Populus trichocarpa POPTR_0009s03790 N 0.884
SapurV1A.0040s0470 Salix purpurea SapurV1A.0040s0470 N 0.881
cassava19450.valid.m1 Manihot esculenta cassava19450.valid.m1 N 0.843
28650.m000191 Ricinus communis 28650.m000191 N 0.827
PRUPE_ppa003149mg Prunus persica PRUPE_ppa003149mg N 0.786
Pm000719 Prunus mume Pm000719 N 0.784
Lus10016521.g Linum usitatissimum Lus10016521.g N 0.773
Lus10040790.g Linum usitatissimum Lus10040790.g N 0.765
evm.TU.supercontig_81.126 Carica papaya evm.TU.supercontig_81.126 N 0.762
TCM_041815 Theobroma cacao TCM_041815 N 0.749
evm.TU.supercontig_81.124 Carica papaya evm.TU.supercontig_81.124 N 0.749
Gorai.003G130600 Gossypium raimondii Gorai.003G130600 N 0.735
GLYMA12G06670 Glycine max GLYMA12G06670 N 0.732
Thhalv10006868m.g Eutrema salsugineum Thhalv10006868m.g N 0.727
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.725
GLYMA11G14750 Glycine max GLYMA11G14750 N 0.724
Ca_16678 Cicer arietinum Ca_16678 N 0.722
orange1.1g046158m.g Citrus sinensis orange1.1g046158m.g N 0.722
Bo01118s010 Brassica oleracea Bo01118s010 N 0.719
VIT_06s0004g04950 Vitis vinifera VIT_06s0004g04950 N 0.719
Gorai.001G111500 Gossypium raimondii Gorai.001G111500 N 0.719
Ciclev10027848m.g Citrus clementina Ciclev10027848m.g N 0.716
Bra030688 Brassica rapa Bra030688 N 0.714
MTR_4g064160 Medicago truncatula MTR_4g064160 N 0.714
cassava19449.valid.m1 Manihot esculenta cassava19449.valid.m1 N 0.714
TCM_041814 Theobroma cacao TCM_041814 N 0.709
Bostr.25219s0207 Boechera stricta Bostr.25219s0207 N 0.705
SCL14 Arabidopsis thaliana AT1G07530 N 0.703
Cagra.1671s0373 Capsella grandiflora Cagra.1671s0373 N 0.703
Carubv10008391m.g Capsella rubella Carubv10008391m.g N 0.703