CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene03285-v1.0-hybrid
(
Fragaria vesca
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
gene03285-v1.0-hybrid
T202554_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna03285.1-v1.0-hybrid
GRAS
206
576
LRKLLIACAEALSDNNMDGFEKLIEKARGAVSISGEPIQRLGAYMVEGLVARKEASGSNIYRALRCREPESDDLLSYMHILYEICPYLKFGYMAANGAIADACRNEDRIHIIDFQIAQGTQWVTLLQALAARPSGAPHVRITGIDDPVSKYARGDGLEAVGRRLKAISEKFNIPVEFHGVPVFAPDVTPDMLDVRPDEALAVNFPLQLHHTPDESVDVNNPRDGLLRIVKSLSPKVTTLVEQESNTNTTPFLNRFIETLDYYLAMFESIDVTLPRNSKDRINVEQHCLARDIVNVIACEGKERVERHELFGKWKSRLTMAGFRQYPLSSYVNSVIRSLLRCYSEHYKLEEKDGAMLLGWKDRNLVSASAWH
Links
Other
GRAS
family TFs
Other
Fragaria vesca
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP14860
Atta cephalotes
ACEP14860
N
0.000
ASIM_0001177701
Anisakis simplex
ASIM_0001177701
N
0.000
EEL_0001074901
Elaeophora elaphi
EEL_0001074901
N
0.000
GL14769
Drosophila persimilis
FBgn0152373
N
0.000
GD16667
Drosophila simulans
FBgn0188257
N
0.000
GPLIN_000819200
Globodera pallida
GPLIN_000819200
N
0.000
GPUH_0000809301
Gongylonema pulchrum
GPUH_0000809301
N
0.000
L892_g7302
Steinernema scapterisci
L892_g7302
N
0.000
LOAG_15212
Loa loa
LOAG_15212
N
0.000
nAv.1.0.1.g03526
Acanthocheilonema viteae
nAv.1.0.1.g03526
N
0.000
nOo.2.0.1.g06132
Onchocerca ochengi
nOo.2.0.1.g06132
N
0.000
OESDEN_08744
Oesophagostomum dentatum
OESDEN_08744
N
0.000
Ogr10463
Ophisaurus gracilis
Ogr10463
N
0.000
PEQ_0000073901
Parascaris equorum
PEQ_0000073901
N
0.000
RPRC011887
Rhodnius prolixus
RPRC011887
N
0.000
Sjc_0121660
Schistosoma japonicum
Sjc_0121660
N
0.000
SNAPOd2T00023082001
Oikopleura dioica
SNAPOd2T00023082001
N
0.000
SNAPOd2T00028278001
Oikopleura dioica
SNAPOd2T00028278001
N
0.000
YQE_11979
Dendroctonus ponderosae
YQE_11979
N
0.000