CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.006G050200
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.006G050200
T202630_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.006G050200.1
GRAS
209
575
SKQTIMEVASAISEGKTDVLNEILARLAQLANAKGNSEQRLTECMLLALKSRLNSVESSPPVTELFSKEHAAATQLLYDLSPCFKLGFMAANQAILDATLDQPSCNKLHVIDFDIGQGGQYTTLLHALSERGRGNPAMIKITCIADNGGDERLKTVGSKLSLVAERLGVRLKFTVVPSLKLSDLSRESLGCELDEPLAVNFAFKLYRMPDESVSVENPRDELLRRVKRLAPCVVTLVEQEINTNTAPFASRVGEAVGYYGALFESIESTFGRENSERVKVEEGLLRKIANSVACEGRDRVERCEVFGKWRARMSMAGFELKPLSESVAESIRARLNCGNPGFTVKEENGGISFGWMGRTLTVASAWR
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB006114
Anopheles albimanus
AALB006114
I
AARA005668
Anopheles arabiensis
AARA005668
I
AATE013518
Anopheles atroparvus
AATE013518
I
ACHR006643
Anopheles christyi
ACHR006643
I
AEPI009874
Anopheles epiroticus
AEPI009874
I
Afo_R010710
Aptenodytes forsteri
Afo_R010710
I
AFUN009066
Anopheles funestus
AFUN009066
I
Alligator_sinensis_CCG000956.1
Alligator sinensis
Alligator_sinensis_CCG000956.1
I
AMIN011056
Anopheles minimus
AMIN011056
I
ASIS018892
Anopheles sinensis
ASIS018892
I
CPIJ001753
Culex quinquefasciatus
CPIJ001753
N
CpipJ_CPIJ001753
Culex pipiens
CpipJ_CPIJ001753
N
D917_09895
Trichinella nativa
D917_09895
I
DILT_0000398401
Diphyllobothrium latum
DILT_0000398401
I
ENSAPLG00000005437
Anas platyrhynchos
ENSAPLG00000005437
I
ELF1
Choloepus hoffmanni
ENSCHOG00000005821
I
ENSCING00000022310
Ciona intestinalis
ENSCING00000022310
I
spi1b
Danio rerio
ENSDARG00000000767
I
SPDEF
Danio rerio
ENSDARG00000029930
N
ETS1
Dasypus novemcinctus
ENSDNOG00000045506
I
SPDEF
Dasypus novemcinctus
ENSDNOG00000047693
N
ENSDORG00000008580
Dipodomys ordii
ENSDORG00000008580
I
Etv4
Dipodomys ordii
ENSDORG00000013847
I
ENSECAG00000021269
Equus caballus
ENSECAG00000021269
I
ETV1
Erinaceus europaeus
ENSEEUG00000002018
I
ENSEEUG00000010347
Erinaceus europaeus
ENSEEUG00000010347
I
SPDEF
Erinaceus europaeus
ENSEEUG00000010400
N
ETV6
Echinops telfairi
ENSETEG00000002501
I
SPIC
Echinops telfairi
ENSETEG00000004217
N
ETS2
Felis catus
ENSFCAG00000007489
I
ETV2
Homo sapiens
ENSG00000105672
D
ELK3
Homo sapiens
ENSG00000111145
D
ENSGACG00000008646
Gasterosteus aculeatus
ENSGACG00000008646
I
ENSGMOG00000002811
Gadus morhua
ENSGMOG00000002811
I
ENSLOCG00000004449
Lepisosteus oculatus
ENSLOCG00000004449
I
ENSMEUG00000003760
Macropus eugenii
ENSMEUG00000003760
I
ENSMEUG00000003986
Macropus eugenii
ENSMEUG00000003986
I
ETS1
Meleagris gallopavo
ENSMGAG00000000967
I
ENSMGAG00000003467
Meleagris gallopavo
ENSMGAG00000003467
I
ENSMGAG00000016365
Meleagris gallopavo
ENSMGAG00000016365
I
GABPA
Microcebus murinus
ENSMICG00000006341
I
ETV5
Microcebus murinus
ENSMICG00000010633
I
ETS2
Monodelphis domestica
ENSMODG00000020979
I
Spic
Mus musculus
ENSMUSG00000004359
D
Ehf
Mus musculus
ENSMUSG00000012350
D
Elf5
Mus musculus
ENSMUSG00000027186
D
ENSOANG00000021194
Ornithorhynchus anatinus
ENSOANG00000021194
N
ENSOANG00000022349
Ornithorhynchus anatinus
ENSOANG00000022349
I
ETV1
Ochotona princeps
ENSOPRG00000003861
I
GABPA
Ochotona princeps
ENSOPRG00000009283
I
ENSP00000227163
Macaca fascicularis
ENSP00000227163
I
ETS2
Procavia capensis
ENSPCAG00000001036
I
ELF3
Procavia capensis
ENSPCAG00000012191
I
ETV6
Procavia capensis
ENSPCAG00000016039
I
ERF
Procavia capensis
ENSPCAG00000016986
I
ELF4
Pteropus vampyrus
ENSPVAG00000004415
I
ENSPVAG00000010230
Pteropus vampyrus
ENSPVAG00000010230
I
GABPA
Pteropus vampyrus
ENSPVAG00000011312
I
ENSSSCG00000003049
Sus scrofa
ENSSSCG00000003049
I
ENSSSCG00000024457
Sus scrofa
ENSSSCG00000024457
I
ENSTBEG00000014406
Tupaia belangeri
ENSTBEG00000014406
I
ENSTBEG00000017397
Tupaia belangeri
ENSTBEG00000017397
I
ENSTNIG00000007898
Tetraodon nigroviridis
ENSTNIG00000007898
N
ENSVPAG00000005650
Vicugna pacos
ENSVPAG00000005650
I
ENSVPAG00000009100
Vicugna pacos
ENSVPAG00000009100
I
Gfo_R003012
Geospiza fortis
Gfo_R003012
N
GPLIN_000810800
Globodera pallida
GPLIN_000810800
N
HCOI00865000
Haemonchus contortus
HCOI00865000
N
HelroG189408
Helobdella robusta
HelroG189408
N
HMEL005115
Heliconius melpomene
HMEL005115
N
HMEL013736
Heliconius melpomene
HMEL013736
N
HPBE_0001740201
Heligmosomoides bakeri
HPBE_0001740201
I
L893_g22986
Steinernema glaseri
L893_g22986
N
L898_g23769
Steinernema monticolum
L898_g23769
N
MESCA005353
Megaselia scalaris
MESCA005353
I
ML46088a
Mnemiopsis leidyi
ML46088a
N
nDi.2.2.2.g11508
Dirofilaria immitis
nDi.2.2.2.g11508
N
OESDEN_02390
Oesophagostomum dentatum
OESDEN_02390
I
OESDEN_14003
Oesophagostomum dentatum
OESDEN_14003
I
PPA28920
Pristionchus pacificus
PPA28920
N
PPAI006589
Phlebotomus papatasi
PPAI006589
I
PXEA_0000391701
Protopolystoma xenopodis
PXEA_0000391701
N
PXEA_0001694401
Protopolystoma xenopodis
PXEA_0001694401
I
scaffold700-EXSNAP2012.3
Pristionchus exspectatus
scaffold700-EXSNAP2012.3
N
SNAPOd2T00022291001
Oikopleura dioica
SNAPOd2T00022291001
N
SPER_0001231601
Spirometra erinaceieuropaei
SPER_0001231601
N
SPER_0003658001
Spirometra erinaceieuropaei
SPER_0003658001
N
SPER_0003941101
Spirometra erinaceieuropaei
SPER_0003941101
I
SROB_0000200901
Schistosoma rodhaini
SROB_0000200901
N
SSLN_0001232601
Schistocephalus solidus
SSLN_0001232601
N
SVUK_0001517201
Strongylus vulgaris
SVUK_0001517201
N
TRE_0000987201
Trichobilharzia regenti
TRE_0000987201
I
gabpa.S
Xenopus laevis
XB-GENE-17331756
I