CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GABPA
(
Pteropus vampyrus
)
Ets
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00178 (Ets)
IPR000418
ENSPVAG00000011312
T176940_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Gabpa
M00157_2.00
Mus musculus
NRCCGGAARY
RYTTCCGGYN
PBM
Badis et al.(2009)
Gabpa_2829
0.843
0.645
Gabpa
M01482_2.00
Mus musculus
RSCGGAARY
RYTTCCGSY
PBM
Wei et al.(2010)
Gabpa
0.843
0.645
GABPA
M02996_2.00
Homo sapiens
RCCGGAAGTD
HACTTCCGGY
SELEX
Jolma et al.(2013)
GABPA_1
0.843
0.645
GABPA
M04768_2.00
Homo sapiens
NRCCGGAARYN
NRYTTCCGGYN
SELEX
Yin et al.(2017)
GABPA_eDBD_HT-SELEX
0.843
0.645
GABPA
M05865_2.00
Homo sapiens
RSCGGAWRYNN
NNRYWTCCGSY
SMiLE-seq
Isakova et al.(2017)
GABPA
0.843
0.645
Gabpa
M08113_2.00
Mus musculus
CCGGAAGYVVN
NBBRCTTCCGG
ChIP-seq
Mathelier et al.(2014)
MA0062.2
0.843
0.645
GABPA
M07952_2.00
Homo sapiens
VVCCGGAAGYV
BRCTTCCGGBB
ChIP-seq
Gerstein et al.(2012)
GM12878_GABP_HudsonAlpha
0.843
0.645
GABPA
M07953_2.00
Homo sapiens
NVCCGGAAGYV
BRCTTCCGGBN
ChIP-seq
Gerstein et al.(2012)
H1-hESC_GABP_HudsonAlpha
0.843
0.645
GABPA
M07954_2.00
Homo sapiens
VVVCCGGAAGYNVN
NBNRCTTCCGGBBB
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_GABP_HudsonAlpha
0.843
0.645
GABPA
M07955_2.00
Homo sapiens
NBVVVSCGGAAGYVV
BBRCTTCCGSBBBVN
ChIP-seq
Gerstein et al.(2012)
HepG2_GABP_HudsonAlpha
0.843
0.645
GABPA
M07956_2.00
Homo sapiens
VVVVCCGGAAGTN
NACTTCCGGBBBB
ChIP-seq
Gerstein et al.(2012)
K562_GABP_HudsonAlpha
0.843
0.645
GABPA
M09056_2.00
Homo sapiens
VVNRSCGGAAGYVV
BBRCTTCCGSYNBB
Misc
Kulakovskiy et al.(2013)
GABPA_HUMAN.H11MO.0.A
0.843
0.645
Gabpa
M09069_2.00
Mus musculus
NVVVSCGGAAGYRV
BYRCTTCCGSBBBN
Misc
Kulakovskiy et al.(2013)
GABPA_MOUSE.H11MO.0.A
0.843
0.645
GABPA
M09535_2.00
Homo sapiens
NRCMGGAAGY
RCTTCCKGYN
Misc
Heinz et al.(2010)
Jurkat-GABPa_GSE17954
0.843
0.645
GABPA
M10504_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GABPA_07
0.843
0.645
GABPA
M10505_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GABPA_08
0.843
0.645
GABPA
M10506_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GABPA_Q4
0.843
0.645
GABPA
M10507_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GABP_B
0.843
0.645
GABPA
M10508_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GADP_01
0.843
0.645
GABPA
M04769_2.00
Homo sapiens
NRCCGGAARYN
NRYTTCCGGYN
SELEX
Yin et al.(2017)
GABPA_eDBD_Methyl-HT-SELEX
0.843
0.645
For this family, TFs with SR scores >
0.717
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000010664
Ets
321
401
QLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWVXXXXXXXXXXXXXXXXXXXYYYDGDMICKVQGKRFVYKFV
Links
Other
Ets
family TFs
Other
Pteropus vampyrus
TFs
114 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ELF4
Pteropus vampyrus
ENSPVAG00000004415
I
0.956
ETS1
Dasypus novemcinctus
ENSDNOG00000045506
I
0.939
ETS2
Felis catus
ENSFCAG00000007489
I
0.939
ETS1
Meleagris gallopavo
ENSMGAG00000000967
I
0.939
HPBE_0001740201
Heligmosomoides bakeri
HPBE_0001740201
I
0.931
OESDEN_02390
Oesophagostomum dentatum
OESDEN_02390
I
0.931
OESDEN_14003
Oesophagostomum dentatum
OESDEN_14003
I
0.931
ETS2
Procavia capensis
ENSPCAG00000001036
I
0.926
ENSTBEG00000017397
Tupaia belangeri
ENSTBEG00000017397
I
0.926
ENSVPAG00000005650
Vicugna pacos
ENSVPAG00000005650
I
0.926
gabpa.S
Xenopus laevis
XB-GENE-17331756
I
0.925
ENSMGAG00000003467
Meleagris gallopavo
ENSMGAG00000003467
I
0.902
DILT_0000398401
Diphyllobothrium latum
DILT_0000398401
I
0.901
SPER_0003941101
Spirometra erinaceieuropaei
SPER_0003941101
I
0.901
Alligator_sinensis_CCG000956.1
Alligator sinensis
Alligator_sinensis_CCG000956.1
I
0.888
SPER_0001231601
Spirometra erinaceieuropaei
SPER_0001231601
N
0.886
Etv4
Dipodomys ordii
ENSDORG00000013847
I
0.882
ENSTBEG00000014406
Tupaia belangeri
ENSTBEG00000014406
I
0.882
ENSVPAG00000009100
Vicugna pacos
ENSVPAG00000009100
I
0.882
ETS2
Monodelphis domestica
ENSMODG00000020979
I
0.852
ETV2
Sorex araneus
ENSSARG00000010742
N
0.851
PXEA_0000391701
Protopolystoma xenopodis
PXEA_0000391701
N
0.847
GABPA
Anolis carolinensis
ENSACAG00000014800
I
0.843
ENSAMEG00000017175
Ailuropoda melanoleuca
ENSAMEG00000017175
I
0.843
ENSAPLG00000009339
Anas platyrhynchos
ENSAPLG00000009339
I
0.843
GABPA
Bos taurus
ENSBTAG00000019043
I
0.843
GABPA
Canis familiaris
ENSCAFG00000008512
I
0.843
GABPA
Choloepus hoffmanni
ENSCHOG00000010323
I
0.843
GABPA
Callithrix jacchus
ENSCJAG00000013817
I
0.843
ENSCPOG00000004704
Cavia porcellus
ENSCPOG00000004704
I
0.843
ENSCSAG00000009015
Chlorocebus sabaeus
ENSCSAG00000009015
I
0.843
GABPA
Dasypus novemcinctus
ENSDNOG00000040145
I
0.843
Gabpa
Dipodomys ordii
ENSDORG00000014904
I
0.843
GABPA
Equus caballus
ENSECAG00000018900
I
0.843
GABPA
Erinaceus europaeus
ENSEEUG00000009111
I
0.843
ENSFALG00000011983
Ficedula albicollis
ENSFALG00000011983
I
0.843
GABPA
Felis catus
ENSFCAG00000027000
I
0.843
GABPA
Homo sapiens
ENSG00000154727
D
0.843
GABPA
Gallus gallus
ENSGALG00000015763
I
0.843
GABPA
Gorilla gorilla
ENSGGOG00000013900
I
0.843
ENSLACG00000003060
Latimeria chalumnae
ENSLACG00000003060
I
0.843
ENSLAFG00000011756
Loxodonta africana
ENSLAFG00000011756
I
0.843
ENSMEUG00000006840
Macropus eugenii
ENSMEUG00000006840
I
0.843
GABPA
Microcebus murinus
ENSMICG00000006341
I
0.843
GABPA
Myotis lucifugus
ENSMLUG00000011151
I
0.843
GABPA
Macaca mulatta
ENSMMUG00000008727
I
0.843
GABPA
Monodelphis domestica
ENSMODG00000021010
I
0.843
ENSMPUG00000001003
Mustela putorius furo
ENSMPUG00000001003
I
0.843
Gabpa
Mus musculus
ENSMUSG00000008976
D
0.843
ENSNLEG00000002433
Nomascus leucogenys
ENSNLEG00000002433
I
0.843
ENSOANG00000022349
Ornithorhynchus anatinus
ENSOANG00000022349
I
0.843
GABPA
Oryctolagus cuniculus
ENSOCUG00000006685
I
0.843
GABPA
Otolemur garnettii
ENSOGAG00000001648
I
0.843
GABPA
Ochotona princeps
ENSOPRG00000009283
I
0.843
ENSPANG00000016228
Papio anubis
ENSPANG00000016228
I
0.843
GABPA
Procavia capensis
ENSPCAG00000005863
I
0.843
ENSPPYG00000011306
Pongo abelii
ENSPPYG00000011306
I
0.843
ENSPSIG00000011806
Pelodiscus sinensis
ENSPSIG00000011806
I
0.843
GABPA
Pan troglodytes
ENSPTRG00000013810
I
0.843
Gabpa
Rattus norvegicus
ENSRNOG00000053205
I
0.843
GABPA
Sorex araneus
ENSSARG00000001665
I
0.843
ENSSHAG00000010701
Sarcophilus harrisii
ENSSHAG00000010701
I
0.843
ENSSTOG00000008645
Ictidomys tridecemlineatus
ENSSTOG00000008645
I
0.843
GABPA
Taeniopygia guttata
ENSTGUG00000013556
I
0.843
ENSTSYG00000005174
Tarsius syrichta
ENSTSYG00000005174
I
0.843
GABPA
Vicugna pacos
ENSVPAG00000006909
I
0.843
Aan_R007370
Calypte anna
Aan_R007370
I
0.843
Afo_R004834
Aptenodytes forsteri
Afo_R004834
I
0.843
Alligator_sinensis_CCG001648.1
Alligator sinensis
Alligator_sinensis_CCG001648.1
I
0.843
Cmyd_10021733
Chelonia mydas
Cmyd_10021733
I
0.843
ENSP00000382948-D1
Bos grunniens
ENSP00000382948-D1
I
0.843
ENSP00000382948
Macaca fascicularis
ENSP00000382948
I
0.843
Gfo_R003322
Geospiza fortis
Gfo_R003322
I
0.843
Myotis_brandtii_GABPA_10008980
Myotis brandtii
Myotis_brandtii_GABPA_10008980
I
0.843
Ogr08173
Ophisaurus gracilis
Ogr08173
I
0.843
Pvit_15606
Pogona vitticeps
Pvit_15606
I
0.843
Tal_R007398
Tyto alba
Tal_R007398
I
0.843
AAI00223
Xenopus laevis
AAI00223
I
0.843
gabpa
Xenopus tropicalis
XB-GENE-987250
I
0.843
gabpa.L
Xenopus laevis
XB-GENE-987254
I
0.843
ENSLOCG00000010754
Lepisosteus oculatus
ENSLOCG00000010754
I
0.841
Myotis_brandtii_GABPA_10027364
Myotis brandtii
Myotis_brandtii_GABPA_10027364
I
0.841
ELK3
Homo sapiens
ENSG00000111145
D
0.839
GPLIN_000810800
Globodera pallida
GPLIN_000810800
N
0.825
Sakowv30013064m.g
Saccoglossus kowalevskii
Sakowv30013064m.g
I
0.820
gabpa
Danio rerio
ENSDARG00000069289
I
0.816
gabpa
Gasterosteus aculeatus
ENSGACG00000003430
I
0.816
ENSONIG00000014304
Oreochromis niloticus
ENSONIG00000014304
I
0.816
gabpa
Oryzias latipes
ENSORLG00000008875
I
0.816
ENSPFOG00000013852
Poecilia formosa
ENSPFOG00000013852
I
0.816
gabpa
Tetraodon nigroviridis
ENSTNIG00000013913
I
0.816
gabpa
Takifugu rubripes
ENSTRUG00000010730
I
0.816
ENSXMAG00000012068
Xiphophorus maculatus
ENSXMAG00000012068
I
0.816
ENSOANG00000021194
Ornithorhynchus anatinus
ENSOANG00000021194
N
0.813
nDi.2.2.2.g11508
Dirofilaria immitis
nDi.2.2.2.g11508
N
0.812
ENSMEUG00000000960
Macropus eugenii
ENSMEUG00000000960
I
0.805
ML46088a
Mnemiopsis leidyi
ML46088a
N
0.803
ENSGMOG00000003239
Gadus morhua
ENSGMOG00000003239
I
0.786
e_gw.474.32.1
Branchiostoma floridae
e_gw.474.32.1
I
0.784
gw.692.11.1
Branchiostoma floridae
gw.692.11.1
I
0.784
ENSAMXG00000002684
Astyanax mexicanus
ENSAMXG00000002684
I
0.776
SPDEF
Dasypus novemcinctus
ENSDNOG00000047693
N
0.765
LotgiG222728
Lottia gigantea
LotgiG222728
I
0.761
SPU_021557
Strongylocentrotus purpuratus
SPU_021557
I
0.761
ENSECAG00000021269
Equus caballus
ENSECAG00000021269
I
0.758
gabpalpha
Ciona intestinalis
ENSCING00000010923
I
0.757
ENSCSAVG00000001056
Ciona savignyi
ENSCSAVG00000001056
I
0.757
GF18561
Drosophila ananassae
FBgn0095579
I
0.750
ENSLAFG00000026253
Loxodonta africana
ENSLAFG00000026253
I
0.747
Hsal_09373--XP_394741.3_APIME
Harpegnathos saltator
Hsal_09373--XP_394741.3_APIME
I
0.744
D917_09895
Trichinella nativa
D917_09895
I
0.736
PHUM368570
Pediculus humanus
PHUM368570
I
0.728
BGLB007713
Biomphalaria glabrata
BGLB007713
I
0.723
Ocbimv22007469m.g
Octopus bimaculoides
Ocbimv22007469m.g
I
0.720