CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10016596.g
(
Linum usitatissimum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Lus10016596.g
T202711_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10016596
GRAS
167
539
LREGLCTCAQFLEDGDMYTVDWLIAELRRMVSVSGEPIQRLGAYVVEGLVARLASSGSAIYKALRCKEPAPASMELLSYMHLLYEICPYFKFGYMSANGAIAEAMKDENRIHIIDFQIAQGTQWITLIQALAARPGGPPHIRITGIDDSTSAYARGGGLDMVGKRLTMLAQQCKVPFEFRSAGVPASEIQVENLKIQPGEAIAVNFALVLHHMPDESVGTQNHRDRLLRLVKGLSPKVVALVEQESNTNTAPFLARFVETLNYYSAIFESIDVTLPREHKERINVEQHCLAREVVNIIACEGAERVERHELLGKWKSRIAMAGFKPYPLSSYVNETIRTLLGNYSSKYRLEEKDGALYLGWMDRDLVSSCAWR
Links
Other
GRAS
family TFs
Other
Linum usitatissimum
TFs
90 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_06649
Capronia coronata
A1O1_06649
I
A1O3_10484
Capronia epimyces
A1O3_10484
I
A1O5_10159
Cladophialophora psammophila
A1O5_10159
I
A1O7_01941
Cladophialophora yegresii
A1O7_01941
I
A1O9_06866
Exophiala aquamarina
A1O9_06866
I
AB00861.1
Alternaria brassicicola
AB00861.1
I
ACRE_019440
Acremonium chrysogenum
ACRE_019440
I
ACRE_020490
Acremonium chrysogenum
ACRE_020490
I
ACRE_030130
Acremonium chrysogenum
ACRE_030130
I
ARB_01292
Arthroderma benhamiae
ARB_01292
I
AUEXF2481DRAFT_27177
Aureobasidium subglaciale
AUEXF2481DRAFT_27177
I
BAUCODRAFT_63686
Baudoinia compniacensis
BAUCODRAFT_63686
I
BBA_01669
Beauveria bassiana
BBA_01669
I
Bcin05g02960
Botrytis cinerea
Bcin05g02960
I
Bcin16g00320
Botrytis cinerea
Bcin16g00320
I
ACLA_030770
Aspergillus clavatus
CADACLAG00002327
I
AFUA_1G03800
Aspergillus fumigatus
CADAFUAG00009294
I
CADANGAG00014030
Aspergillus niger
CADANGAG00014030
I
ANIA_10504
Aspergillus nidulans
CADANIAG00004652
I
ATEG_03831
Aspergillus terreus
CADATEAG00008906
I
NFIA_020870
Neosartorya fischeri
CADNFIAG00001734
I
CCM_09011
Cordyceps militaris
CCM_09011
I
CFIO01_06708
Colletotrichum fioriniae
CFIO01_06708
I
CH063_12126
Colletotrichum higginsianum
CH063_12126
I
CHGG_02020
Chaetomium globosum
CHGG_02020
I
CIMG_04610
Coccidioides immitis
CIMG_04610
I
CMQ_5979
Grosmannia clavigera
CMQ_5979
I
Cob_07183
Colletotrichum orbiculare
Cob_07183
I
COCCADRAFT_98777
Bipolaris zeicola
COCCADRAFT_98777
I
COCMIDRAFT_5378
Bipolaris oryzae
COCMIDRAFT_5378
I
COCSADRAFT_142075
Bipolaris sorokiniana
COCSADRAFT_142075
I
COCVIDRAFT_97148
Bipolaris victoriae
COCVIDRAFT_97148
I
CPC735_071910
Coccidioides posadasii
CPC735_071910
I
CPUR_05074
Claviceps purpurea
CPUR_05074
I
CSUB01_10649
Colletotrichum sublineola
CSUB01_10649
I
DOTSEDRAFT_127076
Dothistroma septosporum
DOTSEDRAFT_127076
I
estExt_Genewise1Plus.C_270154
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_270154
I
estExt_Genewise1Plus.C_40406
Neurospora discreta
estExt_Genewise1Plus.C_40406
I
estExt_Genewise1Plus.C_41920
Cryphonectria parasitica
estExt_Genewise1Plus.C_41920
I
estExt_Genewise1Plus.C_sca_1_chr1_3_01292
Nectria haematococca
estExt_Genewise1Plus.C_sca_1_chr1_3_01292
I
e_gw1.1.2059.1
Mycosphaerella graminicola
e_gw1.1.2059.1
I
e_gw1.9.518.1
Mycosphaerella fijiensis
e_gw1.9.518.1
I
F503_07593
Ophiostoma piceae uamh
F503_07593
I
F503_08863
Ophiostoma piceae uamh
F503_08863
I
FFUJ_00433
Fusarium fujikuroi
FFUJ_00433
I
FFUJ_04592
Fusarium fujikuroi
FFUJ_04592
I
fgenesh1_pg.sca_76_chr13_2_0000013
Nectria haematococca
fgenesh1_pg.sca_76_chr13_2_0000013
I
fgenesh1_pm.00129_#_214
Aspergillus carbonarius
fgenesh1_pm.00129_#_214
I
fgenesh1_pm.sca_26_chr2_2_0000019
Nectria haematococca
fgenesh1_pm.sca_26_chr2_2_0000019
I
FGRRES_00800
Fusarium graminearum
FGRRES_00800
I
FGRRES_16250
Fusarium graminearum
FGRRES_16250
I
FGRRES_17664
Fusarium graminearum
FGRRES_17664
I
FOXG_01137
Fusarium oxysporum
FOXG_01137
I
FPSE_09263
Fusarium pseudograminearum
FPSE_09263
I
FPSE_12020
Fusarium pseudograminearum
FPSE_12020
I
FPSE_12440
Fusarium pseudograminearum
FPSE_12440
I
FVEG_00379
Fusarium verticillioides
FVEG_00379
I
G647_09757
Cladophialophora carrionii
G647_09757
I
GGTG_03334
Gaeumannomyces graminis
GGTG_03334
I
GLRG_00909
Colletotrichum graminicola
GLRG_00909
I
gw1.18.787.1
Nectria haematococca
gw1.18.787.1
I
H101_06954
Trichophyton interdigitale
H101_06954
I
H105_02238
Trichophyton soudanense
H105_02238
I
HMPREF1120_04361
Exophiala dermatitidis
HMPREF1120_04361
I
HMPREF1541_07144
Cyphellophora europaea
HMPREF1541_07144
I
HMPREF1624_06736
Sporothrix schenckii
HMPREF1624_06736
I
HMPREF1624_08785
Sporothrix schenckii
HMPREF1624_08785
I
LEMA_P067510.1
Leptosphaeria maculans
LEMA_P067510.1
I
M437DRAFT_65869
Aureobasidium melanogenum
M437DRAFT_65869
I
M438DRAFT_32848
Aureobasidium pullulans
M438DRAFT_32848
I
MAC_05495
Metarhizium acridum
MAC_05495
I
MAJ_05922
Metarhizium majus
MAJ_05922
I
MAM_07411
Metarhizium album
MAM_07411
I
MANI_000308
Metarhizium anisopliae
MANI_000308
I
MAPG_01446
Magnaporthe poae
MAPG_01446
I
MBR_00159
Metarhizium brunneum
MBR_00159
I
MCYG_05794
Microsporum canis
MCYG_05794
I
MCYG_05794
Arthroderma otae
MCYG_05794
I
MGU_09666
Metarhizium guizhouense
MGU_09666
I
MGYG_02900
Microsporum gypseum
MGYG_02900
I
MPH_09781
Macrophomina phaseolina
MPH_09781
I
MYCFIDRAFT_36148
Pseudocercospora fijiensis
MYCFIDRAFT_36148
I
Mycgr3G33662
Zymoseptoria tritici
Mycgr3G33662
I
MYCTH_2307957
Myceliophthora thermophila
MYCTH_2307957
I
ada-3
Neurospora crassa
NCU02896
D
NechaG11213
Fusarium solani
NechaG11213
I
NechaG65901
Fusarium solani
NechaG65901
I
NechaG88015
Fusarium solani
NechaG88015
I
NechaG91416
Fusarium solani
NechaG91416
I
NEUTE1DRAFT_92483
Neurospora tetrasperma
NEUTE1DRAFT_92483
I
Pc16g08180
Penicillium chrysogenum
Pc16g08180
I
PCH_Pc16g08180
Penicillium rubens
PCH_Pc16g08180
I
PEX1_002120
Penicillium expansum
PEX1_002120
I
PFICI_03077
Pestalotiopsis fici
PFICI_03077
I
PITC_030780
Penicillium italicum
PITC_030780
I
PMAA_055120
Talaromyces marneffei
PMAA_055120
I
PMAA_055120
Penicillium marneffei
PMAA_055120
I
PODANS_1_1340
Podospora anserina
PODANS_1_1340
I
PTRG_10316
Pyrenophora triticirepentis
PTRG_10316
I
PTT_13784
Pyrenophora teres
PTT_13784
I
PV04_02129
Capronia semiimmersa
PV04_02129
I
PV05_07659
Exophiala xenobiotica
PV05_07659
I
PV05_10700
Exophiala xenobiotica
PV05_10700
I
PV06_07997
Exophiala oligosperma
PV06_07997
I
PV07_02419
Cladophialophora immunda
PV07_02419
I
PV09_00486
Verruconis gallopava
PV09_00486
I
PV11_03531
Exophiala sideris
PV11_03531
I
S40285_01095
Stachybotrys chlorohalonata
S40285_01095
I
S40288_07746
Stachybotrys chartarum
S40288_07746
I
SAPIO_CDS1279
Scedosporium apiospermum
SAPIO_CDS1279
I
SBOR_5952
Sclerotinia borealis
SBOR_5952
I
SEPMUDRAFT_148059
Sphaerulina musiva
SEPMUDRAFT_148059
I
SETTUDRAFT_19016
Setosphaeria turcica
SETTUDRAFT_19016
I
SMAC_00550
Sordaria macrospora
SMAC_00550
I
SNOG_00466
Stagonospora nodorum
SNOG_00466
I
SNOG_00466
Phaeosphaeria nodorum
SNOG_00466
I
SPBR_02264
Sporothrix brasiliensis
SPBR_02264
I
SPBR_06491
Sporothrix brasiliensis
SPBR_06491
I
SS1G_02138
Sclerotinia sclerotiorum
SS1G_02138
I
TEQG_00822
Trichophyton equinum
TEQG_00822
I
THITE_123221
Thielavia terrestris
THITE_123221
I
TRIATDRAFT_172200
Trichoderma atroviride
TRIATDRAFT_172200
I
TRIREDRAFT_62297
Trichoderma reesei
TRIREDRAFT_62297
I
TRIVIDRAFT_113147
Trichoderma virens
TRIVIDRAFT_113147
I
TRV_01165
Trichophyton verrucosum
TRV_01165
I
TSTA_017770
Talaromyces stipitatus
TSTA_017770
I
U727_00434000191
Penicillium solitum
U727_00434000191
I
UCREL1_10592
Eutypa lata
UCREL1_10592
I
UCREL1_7993
Eutypa lata
UCREL1_7993
I
UCRNP2_6697
Neofusicoccum parvum
UCRNP2_6697
I
UREG_01815
Uncinocarpus reesii
UREG_01815
I
UV8b_5957
Ustilaginoidea virens
UV8b_5957
I
VDAG_04814
Verticillium dahliae
VDAG_04814
I
VDAG_06235
Verticillium dahliae
VDAG_06235
I
VDBG_09581
Verticillium albo atrum
VDBG_09581
I
VDBG_09581
Verticillium alfalfae
VDBG_09581
I
VHEMI02844
Torrubiella hemipterigena
VHEMI02844
I
VHEMI05094
Torrubiella hemipterigena
VHEMI05094
I
X797_002513
Metarhizium robertsii
X797_002513
I
Z517_00016
Fonsecaea pedrosoi
Z517_00016
I
Z518_05417
Rhinocladiella mackenziei
Z518_05417
I
Z519_12694
Cladophialophora bantiana
Z519_12694
I