CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MDP0000119093
(
Malus domestica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
MDP0000119093
T202795_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000119093
GRAS
378
749
LRTLLISCAQAAAADDHRTANELLRKVRQHSSPFGDGTQRLAHCFANGLEARLAGTGSQIYKGLVSKRTSAADILKAYHLYLAASPFKKMSNFVSNVTIRNLAEKSTRLHVIDFGILYGFQWPTLIQRISWREGGPPKVRITGIEFPQPGFRPAERVEETGRRLAAYAENFKVPFEYNAIAKKWETITLEELKIDKDEVLVVNFIYRGKNLLDESVSVDSVRNRVLALIRRINPDIFIHGIVNGAYNAPFFVTRFREALFHFSALFDMLETVVPREDQERMXIEKEIFGREAMNVIACEGWERVERPETYKQWQVRNLRAGFEQIPFDRELVKRAAKKVSSLYHKDFVIDENSQWLLQGWKGRTVFALSAWK
Links
Other
GRAS
family TFs
Other
Malus domestica
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB004779
Anopheles albimanus
AALB004779
N
ACEP16104
Atta cephalotes
ACEP16104
N
ACEP18439
Atta cephalotes
ACEP18439
N
ACEP25260
Atta cephalotes
ACEP25260
N
ACOM024986
Anopheles coluzzii
ACOM024986
N
AFAF009935
Anopheles farauti
AFAF009935
N
AFAF020534
Anopheles farauti
AFAF020534
N
AMAM018266
Anopheles maculatus
AMAM018266
N
AMEM000859
Anopheles merus
AMEM000859
N
AMEM009812
Anopheles merus
AMEM009812
N
ANCCAN_17995
Ancylostoma caninum
ANCCAN_17995
N
ANCDUO_08930
Ancylostoma duodenale
ANCDUO_08930
N
AQUA010988
Anopheles quadriannulatus
AQUA010988
N
ASIM_0001369201
Anisakis simplex
ASIM_0001369201
N
ASIS022129
Anopheles sinensis
ASIS022129
N
BTMF_0001014001
Brugia timori
BTMF_0001014001
N
CAA04813
Xenopus laevis
CAA04813
N
CapteG199350
Capitella teleta
CapteG199350
N
CGI_10019474
Crassostrea gigas
CGI_10019474
N
CGOC_0001405301
Cylicostephanus goldi
CGOC_0001405301
N
CJA24373
Caenorhabditis japonica
CJA24373
N
CPIJ000431
Culex quinquefasciatus
CPIJ000431
N
CpipJ_CPIJ000431
Culex pipiens
CpipJ_CPIJ000431
N
D915_09884
Fasciola hepatica
D915_09884
N
ECPE_0001087501
Echinostoma caproni
ECPE_0001087501
N
ENSCSAVG00000008312
Ciona savignyi
ENSCSAVG00000008312
N
Tbx15
Dipodomys ordii
ENSDORG00000005620
N
ENSECAG00000002502
Equus caballus
ENSECAG00000002502
I
ENSETEG00000015428
Echinops telfairi
ENSETEG00000015428
I
ENSGACG00000000841
Gasterosteus aculeatus
ENSGACG00000000841
N
ENSGMOG00000002691
Gadus morhua
ENSGMOG00000002691
N
ENSMEUG00000014480
Macropus eugenii
ENSMEUG00000014480
I
Tbx5
Mus musculus
ENSMUSG00000018263
D
Tbx15
Mus musculus
ENSMUSG00000027868
I
ENSOANG00000002255
Ornithorhynchus anatinus
ENSOANG00000002255
N
ENSPMAG00000004017
Petromyzon marinus
ENSPMAG00000004017
N
ENSPMAG00000006729
Petromyzon marinus
ENSPMAG00000006729
N
ENSPMAG00000008021
Petromyzon marinus
ENSPMAG00000008021
N
ENSSSCG00000006723
Sus scrofa
ENSSSCG00000006723
I
ENSTGUG00000013354
Taeniopygia guttata
ENSTGUG00000013354
I
EVEC_0000199201
Enterobius vermicularis
EVEC_0000199201
N
Gfo_R000255
Geospiza fortis
Gfo_R000255
I
GPUH_0000709501
Gongylonema pulchrum
GPUH_0000709501
N
HelroG183031
Helobdella robusta
HelroG183031
N
HPLM_0000022701
Haemonchus placei
HPLM_0000022701
N
ISCW003118
Ixodes scapularis
ISCW003118
N
ISCW019279
Ixodes scapularis
ISCW019279
N
KGM_02695
Danaus plexippus
KGM_02695
N
L893_g18153
Steinernema glaseri
L893_g18153
N
LDEC017550
Leptinotarsa decemlineata
LDEC017550
N
LOAG_12591
Loa loa
LOAG_12591
N
MESCA003495
Megaselia scalaris
MESCA003495
N
nAv.1.0.1.g04274
Acanthocheilonema viteae
nAv.1.0.1.g04274
N
NBR_0000902501
Nippostrongylus brasiliensis
NBR_0000902501
N
NECAME_12883
Necator americanus
NECAME_12883
N
OESDEN_04734
Oesophagostomum dentatum
OESDEN_04734
N
OFLC_0000825301
Onchocerca flexuosa
OFLC_0000825301
N
Ogr02070
Ophisaurus gracilis
Ogr02070
N
Ogr11254
Ophisaurus gracilis
Ogr11254
N
RPRC001599
Rhodnius prolixus
RPRC001599
N
SCUD_0000486401
Schistosoma curassoni
SCUD_0000486401
N
SCUD_0002048701
Schistosoma curassoni
SCUD_0002048701
N
Smp_156660
Schistosoma mansoni
Smp_156660
N
SNAPOd2T00025690001
Oikopleura dioica
SNAPOd2T00025690001
N
SPER_0000102601
Spirometra erinaceieuropaei
SPER_0000102601
N
SPU_017169
Strongylocentrotus purpuratus
SPU_017169
N
SROB_0000780501
Schistosoma rodhaini
SROB_0000780501
N
SVE_1699100
Strongyloides venezuelensis
SVE_1699100
N
SVUK_0001816001
Strongylus vulgaris
SVUK_0001816001
N
TASK_0000235801
Taenia asiatica
TASK_0000235801
N
TELCIR_17831
Teladorsagia circumcincta
TELCIR_17831
N
TsM_001062800
Taenia solium
TsM_001062800
N
TTAC_0001051901
Hydatigera taeniaeformis
TTAC_0001051901
N
WUBG_02590
Wuchereria bancrofti
WUBG_02590
N