CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000119093
(
Malus domestica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
MDP0000119093
T202795_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000119093
GRAS
378
749
LRTLLISCAQAAAADDHRTANELLRKVRQHSSPFGDGTQRLAHCFANGLEARLAGTGSQIYKGLVSKRTSAADILKAYHLYLAASPFKKMSNFVSNVTIRNLAEKSTRLHVIDFGILYGFQWPTLIQRISWREGGPPKVRITGIEFPQPGFRPAERVEETGRRLAAYAENFKVPFEYNAIAKKWETITLEELKIDKDEVLVVNFIYRGKNLLDESVSVDSVRNRVLALIRRINPDIFIHGIVNGAYNAPFFVTRFREALFHFSALFDMLETVVPREDQERMXIEKEIFGREAMNVIACEGWERVERPETYKQWQVRNLRAGFEQIPFDRELVKRAAKKVSSLYHKDFVIDENSQWLLQGWKGRTVFALSAWK
Links
Other
GRAS
family TFs
Other
Malus domestica
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene18433-v1.0-hybrid
Fragaria vesca
gene18433-v1.0-hybrid
N
0.848
SapurV1A.0001s1700
Salix purpurea
SapurV1A.0001s1700
N
0.806
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.750
fgenesh1_pg.C_scaffold_4001848
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_4001848
N
0.703