CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0001s1700
(
Salix purpurea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
SapurV1A.0001s1700
T203103_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0001s1700.1.p
GRAS
373
744
LRTLLISCAQAVAADDRRSANELLKQIRLHSSPFGDGNRRLAHCFADGLEARLAGTGSQIYKGLVSKRTSAADLLKAYRLYLAACPFRKVFNFVSNKTIRYAAGNSMRLHVIDFGILYGFQWPTFIHRLSCRPGGPPKLRMTGIEFPQPGFRPAERVEETGRRLAAYAKEFKVPFEYNAIAKKWETIQLEELKLDPDEVVVVNCLYRAKNLLDETVAVDSPRNIVLDLVRKINPDIFIHGIINGAYNAPFYVTRFREALFHFSAMFDMLETIVPREELERLVIEKEIFGREALNVIACEGWERVERPETYKQWQVRCLRAGFVQLSFDREIVKQATAKVRHSYHKDFLIDEDSRWLLQGWKGRIIYTLSAWK
SapurV1A.0001s1700.2.p
GRAS
291
519
LRTLLISCAQAVAADDRRSANELLKQIRLHSSPFGDGNRRLAHCFADGLEARLAGTGSQIYKGLVSKRTSAADLLKAYRLYLAACPFRKVFNFVSNKTIRYAAGNSMRLHVIDFGILYGFQWPTFIHRLSCRPGGPPKLRMTGIEFPQPGFRPAERVEETGRRLAAYAKEFKVPFEYNAIAKKWETIQLEELKLDPDEVVVVNCLYRAKNLLDETVAVDSPRNIVLDLG
Links
Other
GRAS
family TFs
Other
Salix purpurea
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0006s08690
Populus trichocarpa
POPTR_0006s08690
N
0.949
Ciclev10011141m.g
Citrus clementina
Ciclev10011141m.g
N
0.841
orange1.1g004514m.g
Citrus sinensis
orange1.1g004514m.g
N
0.841
TCM_021920
Theobroma cacao
TCM_021920
N
0.835
cassava2361.valid.m1
Manihot esculenta
cassava2361.valid.m1
N
0.814
29767.m000200
Ricinus communis
29767.m000200
N
0.813
Pm002685
Prunus mume
Pm002685
N
0.811
PRUPE_ppa001883mg
Prunus persica
PRUPE_ppa001883mg
N
0.806
VIT_08s0007g00510
Vitis vinifera
VIT_08s0007g00510
N
0.806
MDP0000119093
Malus domestica
MDP0000119093
N
0.806
gene18433-v1.0-hybrid
Fragaria vesca
gene18433-v1.0-hybrid
N
0.804
Lus10024384.g
Linum usitatissimum
Lus10024384.g
N
0.795
Eucgr.A01279
Eucalyptus grandis
Eucgr.A01279
N
0.792
GLYMA07G15950
Glycine max
GLYMA07G15950
N
0.789
Gorai.007G376400
Gossypium raimondii
Gorai.007G376400
N
0.789
GLYMA18G39920
Glycine max
GLYMA18G39920
N
0.786
Cucsa.175500
Cucumis sativus
Cucsa.175500
N
0.786
Ca_21138
Cicer arietinum
Ca_21138
N
0.784
Cla018179
Citrullus lanatus
Cla018179
N
0.784
GLYMA03G10320
Glycine max
GLYMA03G10320
N
0.778
PGSC0003DMG400008904
Solanum tuberosum
PGSC0003DMG400008904
N
0.771
Solyc09g010920.1
Solanum lycopersicum
Solyc09g010920.1
N
0.770
MTR_7g062120
Medicago truncatula
MTR_7g062120
N
0.767
PK20526.1
Cannabis sativa
PK20526.1
N
0.767
PGSC0003DMG400019200
Solanum tuberosum
PGSC0003DMG400019200
N
0.762
Solyc10g086530.1
Solanum lycopersicum
Solyc10g086530.1
N
0.758
Aquca_009_00954
Aquilegia coerulea
Aquca_009_00954
N
0.749
SCL9
Arabidopsis thaliana
AT2G37650
N
0.740
TCM_042705
Theobroma cacao
TCM_042705
N
0.740
fgenesh1_pg.C_scaffold_4001851
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_4001851
N
0.736
Gorai.011G266200
Gossypium raimondii
Gorai.011G266200
N
0.736
orange1.1g004488m.g
Citrus sinensis
orange1.1g004488m.g
N
0.736
mgf011165m
Mimulus guttatus
mgf011165m
N
0.735
Thhalv10016318m.g
Eutrema salsugineum
Thhalv10016318m.g
N
0.734
fgenesh1_pg.C_scaffold_4001848
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_4001848
N
0.730
Bostr.23794s0312
Boechera stricta
Bostr.23794s0312
N
0.728
Bo3g031890
Brassica oleracea
Bo3g031890
N
0.726
Bra000012
Brassica rapa
Bra000012
N
0.723
Pm000719
Prunus mume
Pm000719
N
0.722
Ciclev10030787m.g
Citrus clementina
Ciclev10030787m.g
N
0.722
Cagra.18121s0006
Capsella grandiflora
Cagra.18121s0006
N
0.720
Carubv10025657m.g
Capsella rubella
Carubv10025657m.g
N
0.720
PRUPE_ppa003149mg
Prunus persica
PRUPE_ppa003149mg
N
0.718
VIT_06s0004g04960
Vitis vinifera
VIT_06s0004g04960
N
0.718
Eucgr.G02939
Eucalyptus grandis
Eucgr.G02939
N
0.718
PDK_20s1329542g002
Phoenix dactylifera
PDK_20s1329542g002
N
0.718
cassava31335.valid.m1
Manihot esculenta
cassava31335.valid.m1
N
0.714
SapurV1A.0451s0060
Salix purpurea
SapurV1A.0451s0060
N
0.714
Si034417m.g
Setaria italica
Si034417m.g
N
0.711
27568.m000253
Ricinus communis
27568.m000253
N
0.711
mgf014897m
Mimulus guttatus
mgf014897m
N
0.709
Eucgr.G02941
Eucalyptus grandis
Eucgr.G02941
N
0.709
Gorai.010G201000
Gossypium raimondii
Gorai.010G201000
N
0.709
Sb01g039670
Sorghum bicolor
Sb01g039670
N
0.708
GRMZM2G049159
Zea mays
GRMZM2G049159
N
0.705
POPTR_0008s05750
Populus trichocarpa
POPTR_0008s05750
N
0.705
VIT_13s0019g01700
Vitis vinifera
VIT_13s0019g01700
N
0.705
cassava15723.m1
Manihot esculenta
cassava15723.m1
N
0.705
Pavir.J32327
Panicum virgatum
Pavir.J32327
N
0.703
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.700
Pavir.Ia03770
Panicum virgatum
Pavir.Ia03770
N
0.700