Pavir.J32327 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.J32327 T203088_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J32327.1.p GRAS 359 730
Pavir.J32327.2.p GRAS 359 730

Links

Other GRAS family TFs
Other Panicum virgatum TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si034417m.g Setaria italica Si034417m.g N 0.981
Pavir.Ia03770 Panicum virgatum Pavir.Ia03770 N 0.968
GRMZM2G049159 Zea mays GRMZM2G049159 N 0.965
LPERR03G24920 Leersia perrieri LPERR03G24920 N 0.954
Sb01g039670 Sorghum bicolor Sb01g039670 N 0.954
GRMZM2G098784 Zea mays GRMZM2G098784 N 0.951
OB03G37330 Oryza brachyantha OB03G37330 N 0.951
OPUNC03G27510 Oryza punctata OPUNC03G27510 N 0.951
OBART03G30260 Oryza barthii OBART03G30260 N 0.949
OGLUM03G30480 Oryza glumaepatula OGLUM03G30480 N 0.949
OMERI03G26460 Oryza meridionalis OMERI03G26460 N 0.949
ORGLA03G0287000 Oryza glaberrima ORGLA03G0287000 N 0.949
MLOC_73193 Hordeum vulgare MLOC_73193 N 0.946
ONIVA03G31510 Oryza nivara ONIVA03G31510 N 0.946
BGIOSGA010017 Oryza indica BGIOSGA010017 N 0.943
OLONG_013585 Oryza longistaminata OLONG_013585 N 0.942
OS03G0690600 Oryza sativa OS03G0690600 N 0.941
F775_08186 Aegilops tauschii F775_08186 N 0.938
Traes_5DL_8FD0CF6B9 Triticum aestivum Traes_5DL_8FD0CF6B9 N 0.938
BRADI4G43680 Brachypodium distachyon BRADI4G43680 N 0.935
Traes_5BL_C8BEC527F Triticum aestivum Traes_5BL_C8BEC527F N 0.935
ORUFI03G31480 Oryza rufipogon ORUFI03G31480 N 0.908
Aquca_009_00954 Aquilegia coerulea Aquca_009_00954 N 0.732
gene18433-v1.0-hybrid Fragaria vesca gene18433-v1.0-hybrid N 0.728
PGSC0003DMG400019200 Solanum tuberosum PGSC0003DMG400019200 N 0.711
TCM_021920 Theobroma cacao TCM_021920 N 0.711
Pm002685 Prunus mume Pm002685 N 0.711
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N 0.708
POPTR_0006s08690 Populus trichocarpa POPTR_0006s08690 N 0.705
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N 0.705
Solyc10g086530.1 Solanum lycopersicum Solyc10g086530.1 N 0.703
orange1.1g004514m.g Citrus sinensis orange1.1g004514m.g N 0.703
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N 0.703
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.700
VIT_08s0007g00510 Vitis vinifera VIT_08s0007g00510 N 0.700