CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_73193
(
Hordeum vulgare
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
MLOC_73193
T200498_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_73193.1
GRAS
401
772
LRTILIHCAQAVAADDRRTANELLKQIKQHSKVNGDGSQRLAFCFAQGLEARLAGTGSQQYHRLVAKRTTASDMLKAYHLYFAACPFKRLSHFLSNQTILSMTKNASKVHIIDFGIYFGLQWPCLIRRLSKREGGPPILRITGIDVPEPGFRPTERIEETGQRLAEYAKKFGVPFEYQGIASKWETIRAEDLKVGKDEVVIVNCLYRFRNLIDETVAVDSPRNRVLNTIRQVNPAIFIHGIVNGSYSVPFFITRFREALFHFSALFDMLEATVPRDDDQRRLIERDLFGREALNVIACEGSDRVERPETYKQWQVRNLRAGFVQSPLNQDIVIKAKDKVKDIYHKDFVIDEDSGWLLQGWKGRIIYAITTWK
MLOC_73193.2
GRAS
401
772
LRTILIHCAQAVAADDRRTANELLKQIKQHSKVNGDGSQRLAFCFAQGLEARLAGTGSQQYHRLVAKRTTASDMLKAYHLYFAACPFKRLSHFLSNQTILSMTKNASKVHIIDFGIYFGLQWPCLIRRLSKREGGPPILRITGIDVPEPGFRPTERIEETGQRLAEYAKKFGVPFEYQGIASKWETIRAEDLKVGKDEVVIVNCLYRFRNLIDETVAVDSPRNRVLNTIRQVNPAIFIHGIVNGSYSVPFFITRFREALFHFSALFDMLEATVPRDDDQRRLIERDLFGREALNVIACEGSDRVERPETYKQWQVRNLRAGFVQSPLNQDIVIKAKDKVKDIYHKDFVIDEDSGWLLQGWKGRIIYAITTWK
MLOC_73193.3
GRAS
401
772
LRTILIHCAQAVAADDRRTANELLKQIKQHSKVNGDGSQRLAFCFAQGLEARLAGTGSQQYHRLVAKRTTASDMLKAYHLYFAACPFKRLSHFLSNQTILSMTKNASKVHIIDFGIYFGLQWPCLIRRLSKREGGPPILRITGIDVPEPGFRPTERIEETGQRLAEYAKKFGVPFEYQGIASKWETIRAEDLKVGKDEVVIVNCLYRFRNLIDETVAVDSPRNRVLNTIRQVNPAIFIHGIVNGSYSVPFFITRFREALFHFSALFDMLEATVPRDDDQRRLIERDLFGREALNVIACEGSDRVERPETYKQWQVRNLRAGFVQSPLNQDIVIKAKDKVKDIYHKDFVIDEDSGWLLQGWKGRIIYAITTWK
MLOC_73193.4
GRAS
401
772
LRTILIHCAQAVAADDRRTANELLKQIKQHSKVNGDGSQRLAFCFAQGLEARLAGTGSQQYHRLVAKRTTASDMLKAYHLYFAACPFKRLSHFLSNQTILSMTKNASKVHIIDFGIYFGLQWPCLIRRLSKREGGPPILRITGIDVPEPGFRPTERIEETGQRLAEYAKKFGVPFEYQGIASKWETIRAEDLKVGKDEVVIVNCLYRFRNLIDETVAVDSPRNRVLNTIRQVNPAIFIHGIVNGSYSVPFFITRFREALFHFSALFDMLEATVPRDDDQRRLIERDLFGREALNVIACEGSDRVERPETYKQWQVRNLRAGFVQSPLNQDIVIKAKDKVKDIYHKDFVIDEDSGWLLQGWKGRIIYAITTWK
Links
Other
GRAS
family TFs
Other
Hordeum vulgare
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_08186
Aegilops tauschii
F775_08186
N
0.992
Traes_5DL_8FD0CF6B9
Triticum aestivum
Traes_5DL_8FD0CF6B9
N
0.992
Traes_5BL_C8BEC527F
Triticum aestivum
Traes_5BL_C8BEC527F
N
0.989
BRADI4G43680
Brachypodium distachyon
BRADI4G43680
N
0.973
Pavir.J32327
Panicum virgatum
Pavir.J32327
N
0.946
Si034417m.g
Setaria italica
Si034417m.g
N
0.941
LPERR03G24920
Leersia perrieri
LPERR03G24920
N
0.935
OBART03G30260
Oryza barthii
OBART03G30260
N
0.932
OGLUM03G30480
Oryza glumaepatula
OGLUM03G30480
N
0.932
OMERI03G26460
Oryza meridionalis
OMERI03G26460
N
0.932
OPUNC03G27510
Oryza punctata
OPUNC03G27510
N
0.932
ORGLA03G0287000
Oryza glaberrima
ORGLA03G0287000
N
0.932
Pavir.Ia03770
Panicum virgatum
Pavir.Ia03770
N
0.932
ONIVA03G31510
Oryza nivara
ONIVA03G31510
N
0.930
OLONG_013585
Oryza longistaminata
OLONG_013585
N
0.928
BGIOSGA010017
Oryza indica
BGIOSGA010017
N
0.927
GRMZM2G049159
Zea mays
GRMZM2G049159
N
0.927
OB03G37330
Oryza brachyantha
OB03G37330
N
0.927
OS03G0690600
Oryza sativa
OS03G0690600
N
0.924
Sb01g039670
Sorghum bicolor
Sb01g039670
N
0.922
GRMZM2G098784
Zea mays
GRMZM2G098784
N
0.914
ORUFI03G31480
Oryza rufipogon
ORUFI03G31480
N
0.895
Traes_5DL_E275797CE
Triticum aestivum
Traes_5DL_E275797CE
N
0.737
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.725
Aquca_009_00954
Aquilegia coerulea
Aquca_009_00954
N
0.716