CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G049159
(
Zea mays
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GRMZM2G049159
T200270_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G049159_P01
GRAS
359
730
LRTILIHCAQAVAADDRRTANELLKQIRHHSKPNGDGTQRLAHCFADGLEARLAGTGSQLYRKLIAKRTTASDMLKAYHLYLAACPFKRLSHFLSNQTILSMTKHASKVHIIDFGIYFGFQWPCLIRRLSKREGGPPVLRITGIDVPQPGFRPTERIEETGQRLAEYAEKLKVPFEYQGIASKWETIRVEDLKVGKDEVVIVNCLYRFRNLIDETVAVDSPRNRVLNTIRQVNPAIFIHGIVNGSYSVPFFITRFREALFHFSALFDMLETTVPRDDAQRALIEREMFGREALNVIACEGSDRVERPETYKQWQVRNLRAGFVQSPLNQEIVMKAKDKVKDIYHKDFVIDEDSGWLLQGWKGRIIYAISTWK
GRMZM2G049159_P03
GRAS
359
730
LRTILIHCAQAVAADDRRTANELLKQIRHHSKPNGDGTQRLAHCFADGLEARLAGTGSQLYRKLIAKRTTASDMLKAYHLYLAACPFKRLSHFLSNQTILSMTKHASKVHIIDFGIYFGFQWPCLIRRLSKREGGPPVLRITGIDVPQPGFRPTERIEETGQRLAEYAEKLKVPFEYQGIASKWETIRVEDLKVGKDEVVIVNCLYRFRNLIDETVAVDSPRNRVLNTIRQVNPAIFIHGIVNGSYSVPFFITRFREALFHFSALFDMLETTVPRDDAQRALIEREMFGREALNVIACEGSDRVERPETYKQWQVRNLRAGFVQSPLNQEIVMKAKDKVKDIYHKDFVIDEDSGWLLQGWKGRIIYAISTWK
Links
Other
GRAS
family TFs
Other
Zea mays
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G098784
Zea mays
GRMZM2G098784
N
0.976
Sb01g039670
Sorghum bicolor
Sb01g039670
N
0.973
Si034417m.g
Setaria italica
Si034417m.g
N
0.970
Pavir.J32327
Panicum virgatum
Pavir.J32327
N
0.965
Pavir.Ia03770
Panicum virgatum
Pavir.Ia03770
N
0.959
OPUNC03G27510
Oryza punctata
OPUNC03G27510
N
0.949
OBART03G30260
Oryza barthii
OBART03G30260
N
0.946
OGLUM03G30480
Oryza glumaepatula
OGLUM03G30480
N
0.946
OMERI03G26460
Oryza meridionalis
OMERI03G26460
N
0.946
ORGLA03G0287000
Oryza glaberrima
ORGLA03G0287000
N
0.946
LPERR03G24920
Leersia perrieri
LPERR03G24920
N
0.943
ONIVA03G31510
Oryza nivara
ONIVA03G31510
N
0.943
BGIOSGA010017
Oryza indica
BGIOSGA010017
N
0.941
OB03G37330
Oryza brachyantha
OB03G37330
N
0.941
OS03G0690600
Oryza sativa
OS03G0690600
N
0.938
MLOC_73193
Hordeum vulgare
MLOC_73193
N
0.927
BRADI4G43680
Brachypodium distachyon
BRADI4G43680
N
0.924
F775_08186
Aegilops tauschii
F775_08186
N
0.922
Traes_5DL_8FD0CF6B9
Triticum aestivum
Traes_5DL_8FD0CF6B9
N
0.922
Traes_5BL_C8BEC527F
Triticum aestivum
Traes_5BL_C8BEC527F
N
0.919
OLONG_013585
Oryza longistaminata
OLONG_013585
N
0.911
ORUFI03G31480
Oryza rufipogon
ORUFI03G31480
N
0.905
Aquca_009_00954
Aquilegia coerulea
Aquca_009_00954
N
0.730
Pm002685
Prunus mume
Pm002685
N
0.716
PRUPE_ppa001883mg
Prunus persica
PRUPE_ppa001883mg
N
0.714
TCM_021920
Theobroma cacao
TCM_021920
N
0.714
VIT_08s0007g00510
Vitis vinifera
VIT_08s0007g00510
N
0.711
PGSC0003DMG400019200
Solanum tuberosum
PGSC0003DMG400019200
N
0.708
Gorai.011G266200
Gossypium raimondii
Gorai.011G266200
N
0.708
Solyc10g086530.1
Solanum lycopersicum
Solyc10g086530.1
N
0.705
Ciclev10030787m.g
Citrus clementina
Ciclev10030787m.g
N
0.705
orange1.1g004488m.g
Citrus sinensis
orange1.1g004488m.g
N
0.705
SapurV1A.0001s1700
Salix purpurea
SapurV1A.0001s1700
N
0.705
POPTR_0006s08690
Populus trichocarpa
POPTR_0006s08690
N
0.703
PGSC0003DMG400008904
Solanum tuberosum
PGSC0003DMG400008904
N
0.700
Solyc09g010920.1
Solanum lycopersicum
Solyc09g010920.1
N
0.700
Ciclev10011141m.g
Citrus clementina
Ciclev10011141m.g
N
0.700
Eucgr.A01279
Eucalyptus grandis
Eucgr.A01279
N
0.700