orange1.1g004488m.g (Citrus sinensis)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 orange1.1g004488m.g T202921_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g004488m GRAS 375 746
orange1.1g004490m GRAS 375 746

Links

Other GRAS family TFs
Other Citrus sinensis TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10030787m.g Citrus clementina Ciclev10030787m.g N 0.995
TCM_042705 Theobroma cacao TCM_042705 N 0.886
Gorai.011G266200 Gossypium raimondii Gorai.011G266200 N 0.881
Gorai.010G201000 Gossypium raimondii Gorai.010G201000 N 0.843
POPTR_0008s05750 Populus trichocarpa POPTR_0008s05750 N 0.838
cassava31335.valid.m1 Manihot esculenta cassava31335.valid.m1 N 0.838
SapurV1A.0451s0060 Salix purpurea SapurV1A.0451s0060 N 0.830
27568.m000253 Ricinus communis 27568.m000253 N 0.827
evm.TU.supercontig_1.422 Carica papaya evm.TU.supercontig_1.422 N 0.822
Lus10023404.g Linum usitatissimum Lus10023404.g N 0.814
mgf014897m Mimulus guttatus mgf014897m N 0.803
Lus10040284.g Linum usitatissimum Lus10040284.g N 0.803
Pm018822 Prunus mume Pm018822 N 0.797
cassava15723.m1 Manihot esculenta cassava15723.m1 N 0.795
PRUPE_ppa021438mg Prunus persica PRUPE_ppa021438mg N 0.792
Eucgr.G02939 Eucalyptus grandis Eucgr.G02939 N 0.789
PGSC0003DMG400006352 Solanum tuberosum PGSC0003DMG400006352 N 0.786
VIT_08s0007g00510 Vitis vinifera VIT_08s0007g00510 N 0.773
Aquca_009_00954 Aquilegia coerulea Aquca_009_00954 N 0.765
Eucgr.G02941 Eucalyptus grandis Eucgr.G02941 N 0.765
VIT_13s0019g01700 Vitis vinifera VIT_13s0019g01700 N 0.759
VIT_13s0019g01810 Vitis vinifera VIT_13s0019g01810 N 0.759
PGSC0003DMG400027198 Solanum tuberosum PGSC0003DMG400027198 N 0.754
Solyc05g053090.1 Solanum lycopersicum Solyc05g053090.1 N 0.754
Pm002685 Prunus mume Pm002685 N 0.751
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N 0.749
Eucgr.G02940 Eucalyptus grandis Eucgr.G02940 N 0.749
Cucsa.175500 Cucumis sativus Cucsa.175500 N 0.741
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N 0.738
orange1.1g004514m.g Citrus sinensis orange1.1g004514m.g N 0.738
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N 0.736
Cla018179 Citrullus lanatus Cla018179 N 0.730
GLYMA07G15950 Glycine max GLYMA07G15950 N 0.729
PGSC0003DMG400008904 Solanum tuberosum PGSC0003DMG400008904 N 0.727
POPTR_0006s08690 Populus trichocarpa POPTR_0006s08690 N 0.727
TCM_021920 Theobroma cacao TCM_021920 N 0.727
GLYMA18G39920 Glycine max GLYMA18G39920 N 0.726
Solyc09g010920.1 Solanum lycopersicum Solyc09g010920.1 N 0.722
VIT_13s0019g01710 Vitis vinifera VIT_13s0019g01710 N 0.722
29767.m000200 Ricinus communis 29767.m000200 N 0.721
Eucgr.A01279 Eucalyptus grandis Eucgr.A01279 N 0.716
GLYMA03G10320 Glycine max GLYMA03G10320 N 0.711
PGSC0003DMG400019200 Solanum tuberosum PGSC0003DMG400019200 N 0.711
mgf011165m Mimulus guttatus mgf011165m N 0.711
Lus10024384.g Linum usitatissimum Lus10024384.g N 0.708
GRMZM2G049159 Zea mays GRMZM2G049159 N 0.705
OBART03G30260 Oryza barthii OBART03G30260 N 0.705
OGLUM03G30480 Oryza glumaepatula OGLUM03G30480 N 0.705
OMERI03G26460 Oryza meridionalis OMERI03G26460 N 0.705
ONIVA03G31510 Oryza nivara ONIVA03G31510 N 0.705
OPUNC03G27510 Oryza punctata OPUNC03G27510 N 0.705
ORGLA03G0287000 Oryza glaberrima ORGLA03G0287000 N 0.705
Ca_21138 Cicer arietinum Ca_21138 N 0.705
BGIOSGA010017 Oryza indica BGIOSGA010017 N 0.703
GRMZM2G098784 Zea mays GRMZM2G098784 N 0.703
OS03G0690600 Oryza sativa OS03G0690600 N 0.703
Sb01g039670 Sorghum bicolor Sb01g039670 N 0.703
LPERR03G24920 Leersia perrieri LPERR03G24920 N 0.700
MTR_7g062120 Medicago truncatula MTR_7g062120 N 0.700
Si034417m.g Setaria italica Si034417m.g N 0.700
cassava2361.valid.m1 Manihot esculenta cassava2361.valid.m1 N 0.700
Eucgr.J01244 Eucalyptus grandis Eucgr.J01244 N 0.700