cassava31335.valid.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava31335.valid.m1 T202080_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava31335.valid.m1 GRAS 374 745

Links

Other GRAS family TFs
Other Manihot esculenta TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27568.m000253 Ricinus communis 27568.m000253 N 0.903
cassava15723.m1 Manihot esculenta cassava15723.m1 N 0.895
TCM_042705 Theobroma cacao TCM_042705 N 0.855
POPTR_0008s05750 Populus trichocarpa POPTR_0008s05750 N 0.854
SapurV1A.0451s0060 Salix purpurea SapurV1A.0451s0060 N 0.849
Lus10023404.g Linum usitatissimum Lus10023404.g N 0.846
Lus10040284.g Linum usitatissimum Lus10040284.g N 0.843
Ciclev10030787m.g Citrus clementina Ciclev10030787m.g N 0.838
orange1.1g004488m.g Citrus sinensis orange1.1g004488m.g N 0.838
Gorai.011G266200 Gossypium raimondii Gorai.011G266200 N 0.832
Gorai.010G201000 Gossypium raimondii Gorai.010G201000 N 0.808
mgf014897m Mimulus guttatus mgf014897m N 0.784
evm.TU.supercontig_1.422 Carica papaya evm.TU.supercontig_1.422 N 0.781
VIT_13s0019g01810 Vitis vinifera VIT_13s0019g01810 N 0.776
XM_002316242.1 Populus trichocarpa POPTR_0010s20980 N 0.775
PGSC0003DMG400006352 Solanum tuberosum PGSC0003DMG400006352 N 0.772
Eucgr.G02939 Eucalyptus grandis Eucgr.G02939 N 0.768
PRUPE_ppa021438mg Prunus persica PRUPE_ppa021438mg N 0.754
Pm018822 Prunus mume Pm018822 N 0.754
Solyc04g011630.1 Solanum lycopersicum Solyc04g011630.1 N 0.749
Eucgr.G02941 Eucalyptus grandis Eucgr.G02941 N 0.749
VIT_13s0019g01700 Vitis vinifera VIT_13s0019g01700 N 0.743
Aquca_009_00954 Aquilegia coerulea Aquca_009_00954 N 0.741
PDK_20s1329542g002 Phoenix dactylifera PDK_20s1329542g002 N 0.741
PGSC0003DMG400027198 Solanum tuberosum PGSC0003DMG400027198 N 0.738
Solyc05g053090.1 Solanum lycopersicum Solyc05g053090.1 N 0.735
Pm002685 Prunus mume Pm002685 N 0.735
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N 0.732
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N 0.732
orange1.1g004514m.g Citrus sinensis orange1.1g004514m.g N 0.732
VIT_08s0007g00510 Vitis vinifera VIT_08s0007g00510 N 0.730
Cla018179 Citrullus lanatus Cla018179 N 0.730
Eucgr.G02940 Eucalyptus grandis Eucgr.G02940 N 0.729
Cucsa.175500 Cucumis sativus Cucsa.175500 N 0.724
mgf011165m Mimulus guttatus mgf011165m N 0.722
POPTR_0006s08690 Populus trichocarpa POPTR_0006s08690 N 0.719
VIT_13s0019g01710 Vitis vinifera VIT_13s0019g01710 N 0.719
TCM_021920 Theobroma cacao TCM_021920 N 0.716
29767.m000200 Ricinus communis 29767.m000200 N 0.715
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N 0.714
GLYMA03G10320 Glycine max GLYMA03G10320 N 0.708
GLYMA07G15950 Glycine max GLYMA07G15950 N 0.705
PGSC0003DMG400019200 Solanum tuberosum PGSC0003DMG400019200 N 0.705
Si034417m.g Setaria italica Si034417m.g N 0.703
GLYMA18G39920 Glycine max GLYMA18G39920 N 0.702
PGSC0003DMG400008904 Solanum tuberosum PGSC0003DMG400008904 N 0.700
Solyc09g010920.1 Solanum lycopersicum Solyc09g010920.1 N 0.700
cassava2361.valid.m1 Manihot esculenta cassava2361.valid.m1 N 0.700
Eucgr.A01279 Eucalyptus grandis Eucgr.A01279 N 0.700