CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_13s0019g01700
(
Vitis vinifera
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
VIT_13s0019g01700
T201839_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_13s0019g01700.t01
GRAS
387
757
LRTLLTLCAQAVAADDRRSANEQLKQIRQHACPMGDGVQRMAYYFANGLEARLAGSGTQIYKGILTKPSAANVLKAYHLLLAVSPFKKVTNFVLNKTITKVAEKAARLHIIDFGIFYGFQWPSFIQRLSSRPGGPPKLRITGIDLPQPGFRPVERVEETGRRLANYARSFNVPFEFNAIAQKWETIQIEDLKINTGELVVVNCRYRFRSLLDESVVVESPRNIVLNLIRKMNPDIFIQGIVNGAYGVPFFMTRFREALFHFSALYDMLETNVPRQSYERRLIEKELFGWEAMNAIACEGSERIERPETYKQWQVRNERAGFRQLPLDQEIVKIAKKRVKSCYHKDFMMDEDGQWLLQGWKGRIIYAISSWK
Links
Other
GRAS
family TFs
Other
Vitis vinifera
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VIT_13s0019g01810
Vitis vinifera
VIT_13s0019g01810
N
0.827
Gorai.011G266200
Gossypium raimondii
Gorai.011G266200
N
0.775
TCM_042705
Theobroma cacao
TCM_042705
N
0.767
VIT_13s0019g01790
Vitis vinifera
VIT_13s0019g01790
N
0.767
Ciclev10030787m.g
Citrus clementina
Ciclev10030787m.g
N
0.762
VIT_13s0019g01710
Vitis vinifera
VIT_13s0019g01710
N
0.759
orange1.1g004488m.g
Citrus sinensis
orange1.1g004488m.g
N
0.759
Gorai.010G201000
Gossypium raimondii
Gorai.010G201000
N
0.756
POPTR_0008s05750
Populus trichocarpa
POPTR_0008s05750
N
0.748
VIT_13s0019g01780
Vitis vinifera
VIT_13s0019g01780
N
0.745
cassava31335.valid.m1
Manihot esculenta
cassava31335.valid.m1
N
0.743
mgf014897m
Mimulus guttatus
mgf014897m
N
0.743
PRUPE_ppa021438mg
Prunus persica
PRUPE_ppa021438mg
N
0.737
Eucgr.G02939
Eucalyptus grandis
Eucgr.G02939
N
0.737
SapurV1A.0451s0060
Salix purpurea
SapurV1A.0451s0060
N
0.737
Pm018822
Prunus mume
Pm018822
N
0.734
27568.m000253
Ricinus communis
27568.m000253
N
0.732
cassava15723.m1
Manihot esculenta
cassava15723.m1
N
0.729
VIT_08s0007g00510
Vitis vinifera
VIT_08s0007g00510
N
0.726
evm.TU.supercontig_1.422
Carica papaya
evm.TU.supercontig_1.422
N
0.726
PGSC0003DMG400006352
Solanum tuberosum
PGSC0003DMG400006352
N
0.724
Eucgr.G02941
Eucalyptus grandis
Eucgr.G02941
N
0.724
Lus10023404.g
Linum usitatissimum
Lus10023404.g
N
0.724
Lus10040284.g
Linum usitatissimum
Lus10040284.g
N
0.721
SapurV1A.0001s1700
Salix purpurea
SapurV1A.0001s1700
N
0.705
Aquca_009_00954
Aquilegia coerulea
Aquca_009_00954
N
0.702
Ciclev10011141m.g
Citrus clementina
Ciclev10011141m.g
N
0.702
orange1.1g004514m.g
Citrus sinensis
orange1.1g004514m.g
N
0.702