CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCL9
(
Arabidopsis thaliana
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
AT2G37650
T199827_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT2G37650.1
GRAS
344
713
LRSLLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHCFANGLEARLAGTGSQIYKGIVSKPRSAAAVLKAHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILYGFQWPTLIHRFSMYGSPKVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKAIAKKWDAIQLEDLDIDRDEITVVNCLYRAENLHDESVKVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDNRWLLQGWKGRTVMALSVWK
AT2G37650.2
GRAS
332
701
LRSLLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHCFANGLEARLAGTGSQIYKGIVSKPRSAAAVLKAHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILYGFQWPTLIHRFSMYGSPKVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKAIAKKWDAIQLEDLDIDRDEITVVNCLYRAENLHDESVKVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDNRWLLQGWKGRTVMALSVWK
Links
Other
GRAS
family TFs
Other
Arabidopsis thaliana
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pg.C_scaffold_4001848
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_4001848
N
0.973
Bostr.23794s0312
Boechera stricta
Bostr.23794s0312
N
0.973
Bo3g031890
Brassica oleracea
Bo3g031890
N
0.962
Bra000012
Brassica rapa
Bra000012
N
0.957
Cagra.18121s0006
Capsella grandiflora
Cagra.18121s0006
N
0.957
Carubv10025657m.g
Capsella rubella
Carubv10025657m.g
N
0.957
Thhalv10016318m.g
Eutrema salsugineum
Thhalv10016318m.g
N
0.948
fgenesh1_pg.C_scaffold_4001851
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_4001851
N
0.938
gene18433-v1.0-hybrid
Fragaria vesca
gene18433-v1.0-hybrid
N
0.750
Ciclev10011141m.g
Citrus clementina
Ciclev10011141m.g
N
0.741
orange1.1g004514m.g
Citrus sinensis
orange1.1g004514m.g
N
0.741
SapurV1A.0001s1700
Salix purpurea
SapurV1A.0001s1700
N
0.740
PRUPE_ppa001883mg
Prunus persica
PRUPE_ppa001883mg
N
0.731
TCM_021920
Theobroma cacao
TCM_021920
N
0.730
Pm002685
Prunus mume
Pm002685
N
0.730
POPTR_0006s08690
Populus trichocarpa
POPTR_0006s08690
N
0.726
Cucsa.175500
Cucumis sativus
Cucsa.175500
N
0.720
29767.m000200
Ricinus communis
29767.m000200
N
0.713
Cla018179
Citrullus lanatus
Cla018179
N
0.711
PGSC0003DMG400019200
Solanum tuberosum
PGSC0003DMG400019200
N
0.708
Eucgr.A01279
Eucalyptus grandis
Eucgr.A01279
N
0.705
Lus10024384.g
Linum usitatissimum
Lus10024384.g
N
0.704
GLYMA03G10320
Glycine max
GLYMA03G10320
N
0.701
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.700