Pavir.J35699 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.J35699 T203092_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J35699.1.p GRAS 198 569
Pavir.J35699.2.p GRAS 87 458
Pavir.J35699.3.p GRAS 198 569

Links

Other GRAS family TFs
Other Panicum virgatum TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00043p00136400 Amborella trichopoda AMTR_s00043p00136400 N 0.741
Aquca_005_00404 Aquilegia coerulea Aquca_005_00404 N 0.722
BGIOSGA025902 Oryza indica BGIOSGA025902 N 0.916
BRADI1G25370 Brachypodium distachyon BRADI1G25370 N 0.916
cassava24578.valid.m1 Manihot esculenta cassava24578.valid.m1 N 0.751
Ca_06943 Cicer arietinum Ca_06943 N 0.746
Ciclev10007843m.g Citrus clementina Ciclev10007843m.g N 0.727
Cucsa.053270 Cucumis sativus Cucsa.053270 N 0.746
Eucgr.F03414 Eucalyptus grandis Eucgr.F03414 N 0.740
evm.TU.supercontig_3097.1 Carica papaya evm.TU.supercontig_3097.1 N 0.787
F775_07373 Aegilops tauschii F775_07373 N 0.914
gene03285-v1.0-hybrid Fragaria vesca gene03285-v1.0-hybrid N 0.772
GLYMA06G41500 Glycine max GLYMA06G41500 N 0.759
GLYMA12G16750 Glycine max GLYMA12G16750 N 0.745
GLYMA12G34420 Glycine max GLYMA12G34420 N 0.754
GLYMA13G36120 Glycine max GLYMA13G36120 N 0.762
Gorai.002G080600 Gossypium raimondii Gorai.002G080600 N 0.754
Gorai.009G427800 Gossypium raimondii Gorai.009G427800 N 0.727
Gorai.013G164700 Gossypium raimondii Gorai.013G164700 N 0.754
GRMZM5G821439 Zea mays GRMZM5G821439 N 0.959
GSMUA_Achr6G24310_001 Musa acuminata GSMUA_Achr6G24310_001 N 0.792
GSMUA_Achr8G03610_001 Musa acuminata GSMUA_Achr8G03610_001 N 0.861
GSMUA_Achr8G03620_001 Musa acuminata GSMUA_Achr8G03620_001 N 0.714
LPERR07G15240 Leersia perrieri LPERR07G15240 N 0.764
Lus10035840.g Linum usitatissimum Lus10035840.g N 0.734
Lus10036623.g Linum usitatissimum Lus10036623.g N 0.716
MDP0000205622 Malus domestica MDP0000205622 N 0.754
mgf007614m Mimulus guttatus mgf007614m N 0.748
MLOC_37712 Hordeum vulgare MLOC_37712 N 0.927
MTR_2g082090 Medicago truncatula MTR_2g082090 N 0.743
OB07G23640 Oryza brachyantha OB07G23640 N 0.927
OBART07G17780 Oryza barthii OBART07G17780 N 0.916
OGLUM07G17420 Oryza glumaepatula OGLUM07G17420 N 0.916
OLONG_024541 Oryza longistaminata OLONG_024541 N 0.916
OMERI07G14660 Oryza meridionalis OMERI07G14660 N 0.916
ONIVA07G16090 Oryza nivara ONIVA07G16090 N 0.916
OPUNC07G16570 Oryza punctata OPUNC07G16570 N 0.930
orange1.1g040563m.g Citrus sinensis orange1.1g040563m.g N 0.708
ORGLA07G0142600 Oryza glaberrima ORGLA07G0142600 N 0.916
ORUFI07G18480 Oryza rufipogon ORUFI07G18480 N 0.916
CIGR1 Oryza sativa OS07G0545800 N 0.916
Pavir.Bb02923 Panicum virgatum Pavir.Bb02923 N 0.981
PGSC0003DMG400019232 Solanum tuberosum PGSC0003DMG400019232 N 0.737
PGSC0003DMG400021802 Solanum tuberosum PGSC0003DMG400021802 N 0.724
PK07026.1 Cannabis sativa PK07026.1 N 0.762
Pm029452 Prunus mume Pm029452 N 0.764
POPTR_0001s44090 Populus trichocarpa POPTR_0001s44090 N 0.741
POPTR_0011s13460 Populus trichocarpa POPTR_0011s13460 N 0.746
PRUPE_ppa003323mg Prunus persica PRUPE_ppa003323mg N 0.773
SapurV1A.0327s0070 Salix purpurea SapurV1A.0327s0070 N 0.721
SapurV1A.3085s0020 Salix purpurea SapurV1A.3085s0020 N 0.744
Sb02g035680 Sorghum bicolor Sb02g035680 N 0.951
Si029156m.g Setaria italica Si029156m.g N 0.981
Solyc07g063940.1 Solanum lycopersicum Solyc07g063940.1 N 0.735
Solyc12g005340.1 Solanum lycopersicum Solyc12g005340.1 N 0.729
TCM_031132 Theobroma cacao TCM_031132 N 0.759
Traes_2AS_620B821281 Triticum aestivum Traes_2AS_620B821281 N 0.913
Traes_2BS_4600D4B54 Triticum aestivum Traes_2BS_4600D4B54 N 0.919
Traes_2DS_2D035BAFD Triticum aestivum Traes_2DS_2D035BAFD N 0.914
TRIUR3_35245 Triticum urartu TRIUR3_35245 N 0.916
VIT_19s0014g04940 Vitis vinifera VIT_19s0014g04940 N 0.778