CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10011122m.g
(
Eutrema salsugineum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Thhalv10011122m.g
T203199_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10011122m
GRAS
179
547
VLKAIHDCARNLEIKPDVAAETLVRIRESVSDSGDPTERVGFYFTEALSKRLSSTAKKETESPSLKDFILSYKTLNDACPFSKFAHLTANQAILEATHNSSNIHIVDFGIFQGVQWAALLQALATRASGKPARIRISGIPAPSLGDSPGMSLIATGNRLRDFAAVLDLNFEFYPILTPIHLLNVSSFRVEPDDFLAVNFMLELYKLLDETATIVDNALRLARSLNPRIVTLGEYEVSLNRVEFVNRVKNALRFYSAVFESLEPNLERDSKERLRVERVLFGRRIADLVRPGNNKPGNRSGRMEEKEQWRVLMEKAGFEPVKPSNYAVSQASLLLWSYNYSTLYSLVESEPGFISLAWDNVPLLTVSSWR
Links
Other
GRAS
family TFs
Other
Eutrema salsugineum
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL008832
Aedes aegypti
AAEL008832
I
AALB008878
Anopheles albimanus
AALB008878
I
AARA006907
Anopheles arabiensis
AARA006907
I
AATE000717
Anopheles atroparvus
AATE000717
I
ACUA012004
Anopheles culicifacies
ACUA012004
I
ACYPI005943
Acyrthosiphon pisum
ACYPI005943
I
ADAC006994
Anopheles darlingi
ADAC006994
I
ADIR002427
Anopheles dirus
ADIR002427
I
AFAF006655
Anopheles farauti
AFAF006655
I
AFUN001697
Anopheles funestus
AFUN001697
I
AGAP013178
Anopheles gambiae
AGAP013178
I
AMAM012648
Anopheles maculatus
AMAM012648
I
AMEC021917
Anopheles melas
AMEC021917
I
AMEM007698
Anopheles merus
AMEM007698
I
AMIN003345
Anopheles minimus
AMIN003345
I
AQUA002332
Anopheles quadriannulatus
AQUA002332
I
ASIS003979
Anopheles sinensis
ASIS003979
I
ASTEI05563
Anopheles stephensi
ASTEI05563
I
BGLB008394
Biomphalaria glabrata
BGLB008394
I
CapteG102038
Capitella teleta
CapteG102038
I
Cflo_06973--XP_625198.2_APIME
Camponotus floridanus
Cflo_06973--XP_625198.2_APIME
I
CGI_10011126
Crassostrea gigas
CGI_10011126
I
Cmyd_10013867
Chelonia mydas
Cmyd_10013867
I
CPIJ002020
Culex quinquefasciatus
CPIJ002020
I
CpipJ_CPIJ002020
Culex pipiens
CpipJ_CPIJ002020
I
DAPPUDRAFT_8207
Daphnia pulex
DAPPUDRAFT_8207
I
FOXN3
Anolis carolinensis
ENSACAG00000012791
I
FOXN2
Anolis carolinensis
ENSACAG00000014236
I
ENSAMEG00000001627
Ailuropoda melanoleuca
ENSAMEG00000001627
I
ENSAMEG00000006413
Ailuropoda melanoleuca
ENSAMEG00000006413
I
ENSAMXG00000001149
Astyanax mexicanus
ENSAMXG00000001149
I
ENSAMXG00000008216
Astyanax mexicanus
ENSAMXG00000008216
I
ENSAMXG00000009484
Astyanax mexicanus
ENSAMXG00000009484
I
ENSAMXG00000011599
Astyanax mexicanus
ENSAMXG00000011599
I
ENSAMXG00000018596
Astyanax mexicanus
ENSAMXG00000018596
I
ENSAPLG00000009060
Anas platyrhynchos
ENSAPLG00000009060
I
ENSAPLG00000016372
Anas platyrhynchos
ENSAPLG00000016372
I
FOXN2
Bos taurus
ENSBTAG00000015151
I
ENSBTAG00000046684
Bos taurus
ENSBTAG00000046684
I
FOXN3
Canis familiaris
ENSCAFG00000011068
I
FOXN2
Canis familiaris
ENSCAFG00000029603
I
FOXN2
Choloepus hoffmanni
ENSCHOG00000000109
I
FOXN2
Callithrix jacchus
ENSCJAG00000010894
I
FOXN3
Callithrix jacchus
ENSCJAG00000017620
I
FOXN3
Cavia porcellus
ENSCPOG00000004079
I
ENSCPOG00000026162
Cavia porcellus
ENSCPOG00000026162
I
ENSCSAG00000013601
Chlorocebus sabaeus
ENSCSAG00000013601
I
foxn3
Danio rerio
ENSDARG00000012833
I
ches1
Danio rerio
ENSDARG00000043553
I
foxn2b
Danio rerio
ENSDARG00000045105
I
CABZ01056727.1
Danio rerio
ENSDARG00000055574
I
si:ch211-145o7.3
Danio rerio
ENSDARG00000061548
I
FOXN3
Dasypus novemcinctus
ENSDNOG00000003188
I
FOXN2
Dasypus novemcinctus
ENSDNOG00000035609
I
Foxn2
Dipodomys ordii
ENSDORG00000007020
I
ENSDORG00000007387
Dipodomys ordii
ENSDORG00000007387
I
FOXN2
Equus caballus
ENSECAG00000008390
I
FOXN3
Equus caballus
ENSECAG00000026917
I
ENSEEUG00000008958
Erinaceus europaeus
ENSEEUG00000008958
I
FOXN2
Erinaceus europaeus
ENSEEUG00000015228
I
FOXN2
Echinops telfairi
ENSETEG00000007413
I
ENSFALG00000011112
Ficedula albicollis
ENSFALG00000011112
I
ENSFALG00000012332
Ficedula albicollis
ENSFALG00000012332
I
FOXN3
Felis catus
ENSFCAG00000012929
I
FOXN2
Felis catus
ENSFCAG00000022828
I
FOXN3
Homo sapiens
ENSG00000053254
D
FOXN2
Homo sapiens
ENSG00000170802
D
foxn2b
Gasterosteus aculeatus
ENSGACG00000005486
I
ENSGACG00000017049
Gasterosteus aculeatus
ENSGACG00000017049
I
FOXN2
Gallus gallus
ENSGALG00000008942
I
FOXN3
Gallus gallus
ENSGALG00000010665
I
FOXN2
Gorilla gorilla
ENSGGOG00000008171
I
FOXN3
Gorilla gorilla
ENSGGOG00000023852
I
ENSGMOG00000003346
Gadus morhua
ENSGMOG00000003346
I
ENSGMOG00000016028
Gadus morhua
ENSGMOG00000016028
I
ENSGMOG00000018188
Gadus morhua
ENSGMOG00000018188
I
ENSLACG00000006234
Latimeria chalumnae
ENSLACG00000006234
I
ENSLACG00000013808
Latimeria chalumnae
ENSLACG00000013808
I
ENSLACG00000015298
Latimeria chalumnae
ENSLACG00000015298
I
FOXN2
Loxodonta africana
ENSLAFG00000012466
I
FOXN3
Loxodonta africana
ENSLAFG00000016005
I
ENSLOCG00000000880
Lepisosteus oculatus
ENSLOCG00000000880
I
ENSLOCG00000008977
Lepisosteus oculatus
ENSLOCG00000008977
I
ENSLOCG00000016292
Lepisosteus oculatus
ENSLOCG00000016292
I
ENSMEUG00000000214
Macropus eugenii
ENSMEUG00000000214
I
FOXN2
Meleagris gallopavo
ENSMGAG00000005062
I
FOXN3
Meleagris gallopavo
ENSMGAG00000013026
I
FOXN3
Myotis lucifugus
ENSMLUG00000008780
I
FOXN2
Myotis lucifugus
ENSMLUG00000017567
I
FOXN3
Macaca mulatta
ENSMMUG00000019898
I
FOXN2
Macaca mulatta
ENSMMUG00000020677
I
FOXN2
Monodelphis domestica
ENSMODG00000001169
I
ENSMPUG00000008174
Mustela putorius furo
ENSMPUG00000008174
I
ENSMPUG00000010993
Mustela putorius furo
ENSMPUG00000010993
I
Foxn3
Mus musculus
ENSMUSG00000033713
I
Foxn2
Mus musculus
ENSMUSG00000034998
I
ENSNLEG00000008649
Nomascus leucogenys
ENSNLEG00000008649
I
ENSNLEG00000016989
Nomascus leucogenys
ENSNLEG00000016989
I
ENSOARG00000004763
Ovis aries
ENSOARG00000004763
I
FOXN3
Oryctolagus cuniculus
ENSOCUG00000004392
I
FOXN2
Oryctolagus cuniculus
ENSOCUG00000009784
I
FOXN3
Otolemur garnettii
ENSOGAG00000001733
I
FOXN2
Otolemur garnettii
ENSOGAG00000011745
I
ENSONIG00000001158
Oreochromis niloticus
ENSONIG00000001158
I
ENSONIG00000009856
Oreochromis niloticus
ENSONIG00000009856
I
FOXN3
Ochotona princeps
ENSOPRG00000002931
I
FOXN2
Ochotona princeps
ENSOPRG00000007661
I
ches1
Oryzias latipes
ENSORLG00000010729
I
foxn2b
Oryzias latipes
ENSORLG00000011005
I
ENSP00000261302
Macaca fascicularis
ENSP00000261302
I
ENSP00000343633
Macaca fascicularis
ENSP00000343633
I
ENSPANG00000013263
Papio anubis
ENSPANG00000013263
I
ENSPANG00000016397
Papio anubis
ENSPANG00000016397
I
FOXN2
Procavia capensis
ENSPCAG00000005254
I
FOXN3
Procavia capensis
ENSPCAG00000013761
I
ENSPFOG00000001305
Poecilia formosa
ENSPFOG00000001305
I
ENSPFOG00000015286
Poecilia formosa
ENSPFOG00000015286
I
ENSPFOG00000021830
Poecilia formosa
ENSPFOG00000021830
I
ENSPPYG00000012423
Pongo abelii
ENSPPYG00000012423
I
ENSPSIG00000013517
Pelodiscus sinensis
ENSPSIG00000013517
I
ENSPSIG00000016369
Pelodiscus sinensis
ENSPSIG00000016369
I
FOXN3
Pan troglodytes
ENSPTRG00000006614
I
FOXN2
Pan troglodytes
ENSPTRG00000011908
I
FOXN2
Pteropus vampyrus
ENSPVAG00000003737
I
Foxn3
Rattus norvegicus
ENSRNOG00000004709
I
Foxn2
Rattus norvegicus
ENSRNOG00000040110
I
FOXN2
Sorex araneus
ENSSARG00000003696
I
ENSSHAG00000001461
Sarcophilus harrisii
ENSSHAG00000001461
I
ENSSHAG00000010850
Sarcophilus harrisii
ENSSHAG00000010850
I
FOXN3
Sus scrofa
ENSSSCG00000002429
I
FOXN2
Sus scrofa
ENSSSCG00000029593
I
ENSSTOG00000000862
Ictidomys tridecemlineatus
ENSSTOG00000000862
I
ENSSTOG00000014643
Ictidomys tridecemlineatus
ENSSTOG00000014643
I
FOXN3
Tupaia belangeri
ENSTBEG00000003603
I
ENSTGUG00000012441
Taeniopygia guttata
ENSTGUG00000012441
I
ENSTNIG00000002057
Tetraodon nigroviridis
ENSTNIG00000002057
I
ENSTNIG00000009703
Tetraodon nigroviridis
ENSTNIG00000009703
I
foxn2b
Tetraodon nigroviridis
ENSTNIG00000016601
I
ches1
Takifugu rubripes
ENSTRUG00000003497
I
foxn2b
Takifugu rubripes
ENSTRUG00000013724
I
ENSTSYG00000014704
Tarsius syrichta
ENSTSYG00000014704
I
FOXN3
Tursiops truncatus
ENSTTRG00000000817
I
FOXN2
Tursiops truncatus
ENSTTRG00000003735
I
FOXN2
Vicugna pacos
ENSVPAG00000009218
I
ENSXMAG00000001667
Xiphophorus maculatus
ENSXMAG00000001667
I
ENSXMAG00000013148
Xiphophorus maculatus
ENSXMAG00000013148
I
CHES-1-like
Drosophila melanogaster
FBgn0029504
D
GF21122
Drosophila ananassae
FBgn0098127
I
GG17614
Drosophila erecta
FBgn0109837
I
GH12836
Drosophila grimshawi
FBgn0120315
I
GI14920
Drosophila mojavensis
FBgn0137671
I
GL14605
Drosophila persimilis
FBgn0152210
I
GM17463
Drosophila sechellia
FBgn0172373
I
GJ18953
Drosophila virilis
FBgn0206099
I
GK19775
Drosophila willistoni
FBgn0221773
I
GE17515
Drosophila yakuba
FBgn0234975
I
GA27773
Drosophila pseudoobscura
FBgn0249137
I
GB45298
Apis mellifera
GB45298
I
gw.10.104.1
Branchiostoma floridae
gw.10.104.1
I
gw.384.13.1
Branchiostoma floridae
gw.384.13.1
I
HMEL010214
Heliconius melpomene
HMEL010214
I
Hsal_12079--XP_625198.2_APIME
Harpegnathos saltator
Hsal_12079--XP_625198.2_APIME
I
KGM_12006
Danaus plexippus
KGM_12006
I
L798_02484
Zootermopsis nevadensis
L798_02484
I
LCUP017282
Lucilia cuprina
LCUP017282
I
LLOJ006903
Lutzomyia longipalpis
LLOJ006903
I
LotgiG138633
Lottia gigantea
LotgiG138633
I
MDOA011809
Musca domestica
MDOA011809
I
Myotis_brandtii_FOXN2_10033482
Myotis brandtii
Myotis_brandtii_FOXN2_10033482
I
NEMVEDRAFT_v1g67209
Nematostella vectensis
NEMVEDRAFT_v1g67209
D
NV15444
Nasonia vitripennis
NV15444
I
Ogr01321
Ophisaurus gracilis
Ogr01321
I
Ogr07715
Ophisaurus gracilis
Ogr07715
I
PHUM603440
Pediculus humanus
PHUM603440
I
Pvit_15105
Pogona vitticeps
Pvit_15105
I
Sakowv30028653m.g
Saccoglossus kowalevskii
Sakowv30028653m.g
I
SINV12530
Solenopsis invicta
SINV12530
I
TC030764
Tribolium castaneum
TC030764
I
tetur19g01540
Tetranychus urticae
tetur19g01540
I
TriadG17577
Trichoplax adhaerens
TriadG17577
D
foxn3
Xenopus tropicalis
XB-GENE-483117
I
foxn3.L
Xenopus laevis
XB-GENE-6448222
I
foxn3.S
Xenopus laevis
XB-GENE-864945
I
foxn2
Xenopus tropicalis
XB-GENE-952918
I
foxn2.S
Xenopus laevis
XB-GENE-952923
I
YQE_02614
Dendroctonus ponderosae
YQE_02614
I
YQE_02630
Dendroctonus ponderosae
YQE_02630
I
YQE_03399
Dendroctonus ponderosae
YQE_03399
I