CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FOXN3
(
Tupaia belangeri
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSTBEG00000003603
T187125_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXN3
M01227_2.00
Homo sapiens
GTAAACAA
TTGTTTAC
PBM
Lambert et al.(2019)
pTH11266
0.898
1.000
NEMVEDRAFT_v1g67209
M01016_2.00
Nematostella vectensis
NNDWHRMNNN
NNNKYDWHNN
PBM
Nakagawa et al.(2013)
FoxN2-3_Nvec
0.787
0.767
FOXN2
M01007_2.00
Homo sapiens
NNGACGCNN
NNGCGTCNN
PBM
Nakagawa et al.(2013)
FOXN2
0.723
0.767
FOXN2
M04835_2.00
Homo sapiens
NNGCGTSNNNNNSACGCNN
NNGCGTSNNNNNSACGCNN
SELEX
Yin et al.(2017)
FOXN2_eDBD_HT-SELEX
0.723
0.767
FOXN2
M04836_2.00
Homo sapiens
NGCATMRBNNYKATGCH
DGCATMRNNVYKATGCN
SELEX
Yin et al.(2017)
FOXN2_eDBD_Methyl-HT-SELEX
0.723
0.767
CHES-1-like
M01013_2.00
Drosophila melanogaster
NNNHHRMNNN
NNNKYDDNNN
PBM
Nakagawa et al.(2013)
CHES-1-like
0.686
0.709
CHES-1-like
M03745_2.00
Drosophila melanogaster
DHRTAAACAAW
WTTGTTTAYDH
SELEX
Nitta et al.(2015)
CHES-1-like_1
0.686
0.709
CHES-1-like
M03746_2.00
Drosophila melanogaster
GCGTCNNYRTAAACAAW
WTTGTTTAYRNNGACGC
SELEX
Nitta et al.(2015)
CHES-1-like_2
0.686
0.709
CHES-1-like
M03747_2.00
Drosophila melanogaster
WNVGCGTCHWNGACGCNNW
WNNGCGTCNWDGACGCBNW
SELEX
Nitta et al.(2015)
CHES-1-like_3
0.686
0.709
CHES-1-like
M03748_2.00
Drosophila melanogaster
DNGCGTCHNNDGACGCNN
NNGCGTCHNNDGACGCNH
SELEX
Nitta et al.(2015)
CHES-1-like_4
0.686
0.709
CHES-1-like
M03749_2.00
Drosophila melanogaster
HNGCGTCHNGACGCNN
NNGCGTCNDGACGCND
SELEX
Nitta et al.(2015)
CHES-1-like_5
0.686
0.709
TriadG17577
M01018_2.00
Trichoplax adhaerens
NNNHHDNNNN
NNNNHDDNNN
PBM
Nakagawa et al.(2013)
FoxN2_3
0.664
0.779
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000003127
Forkhead
114
204
KPPYSFSCLIFMAIEDSPTKRLPVKDIYNWILEHFPYFANAPTGWKNSVRHNLSLNKCFKKVDKERSQSIGKGSLWCIDPEYRQNLIQALK
Links
Other
Forkhead
family TFs
Other
Tupaia belangeri
TFs
205 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FOXN3
Anolis carolinensis
ENSACAG00000012791
I
0.898
ENSAMEG00000001627
Ailuropoda melanoleuca
ENSAMEG00000001627
I
0.898
ENSAPLG00000009060
Anas platyrhynchos
ENSAPLG00000009060
I
0.898
FOXN3
Canis familiaris
ENSCAFG00000011068
I
0.898
FOXN3
Callithrix jacchus
ENSCJAG00000017620
I
0.898
FOXN3
Cavia porcellus
ENSCPOG00000004079
I
0.898
FOXN3
Dasypus novemcinctus
ENSDNOG00000003188
I
0.898
ENSEEUG00000008958
Erinaceus europaeus
ENSEEUG00000008958
I
0.898
ENSFALG00000012332
Ficedula albicollis
ENSFALG00000012332
I
0.898
FOXN3
Homo sapiens
ENSG00000053254
D
0.898
FOXN3
Gallus gallus
ENSGALG00000010665
I
0.898
FOXN3
Gorilla gorilla
ENSGGOG00000023852
I
0.898
ENSLACG00000015298
Latimeria chalumnae
ENSLACG00000015298
I
0.898
FOXN3
Loxodonta africana
ENSLAFG00000016005
I
0.898
FOXN3
Meleagris gallopavo
ENSMGAG00000013026
I
0.898
FOXN3
Myotis lucifugus
ENSMLUG00000008780
I
0.898
FOXN3
Macaca mulatta
ENSMMUG00000019898
I
0.898
ENSMPUG00000008174
Mustela putorius furo
ENSMPUG00000008174
I
0.898
Foxn3
Mus musculus
ENSMUSG00000033713
I
0.898
ENSNLEG00000016989
Nomascus leucogenys
ENSNLEG00000016989
I
0.898
FOXN3
Oryctolagus cuniculus
ENSOCUG00000004392
I
0.898
FOXN3
Ochotona princeps
ENSOPRG00000002931
I
0.898
ENSPANG00000016397
Papio anubis
ENSPANG00000016397
I
0.898
FOXN3
Procavia capensis
ENSPCAG00000013761
I
0.898
ENSPSIG00000013517
Pelodiscus sinensis
ENSPSIG00000013517
I
0.898
FOXN3
Pan troglodytes
ENSPTRG00000006614
I
0.898
Foxn3
Rattus norvegicus
ENSRNOG00000004709
I
0.898
ENSSHAG00000010850
Sarcophilus harrisii
ENSSHAG00000010850
I
0.898
FOXN3
Sus scrofa
ENSSSCG00000002429
I
0.898
ENSSTOG00000014643
Ictidomys tridecemlineatus
ENSSTOG00000014643
I
0.898
ENSTGUG00000012441
Taeniopygia guttata
ENSTGUG00000012441
I
0.898
FOXN3
Tursiops truncatus
ENSTTRG00000000817
I
0.898
ENSP00000261302
Macaca fascicularis
ENSP00000261302
I
0.898
foxn3
Xenopus tropicalis
XB-GENE-483117
I
0.898
FOXN3
Felis catus
ENSFCAG00000012929
I
0.886
ENSAMXG00000009484
Astyanax mexicanus
ENSAMXG00000009484
I
0.884
Cmyd_10013867
Chelonia mydas
Cmyd_10013867
I
0.869
ENSAMXG00000018596
Astyanax mexicanus
ENSAMXG00000018596
I
0.865
foxn3
Danio rerio
ENSDARG00000012833
I
0.865
FOXN3
Otolemur garnettii
ENSOGAG00000001733
I
0.865
Ogr01321
Ophisaurus gracilis
Ogr01321
I
0.865
ches1
Danio rerio
ENSDARG00000043553
I
0.860
foxn3.L
Xenopus laevis
XB-GENE-6448222
I
0.860
foxn3.S
Xenopus laevis
XB-GENE-864945
I
0.860
ENSDORG00000007387
Dipodomys ordii
ENSDORG00000007387
I
0.857
FOXN3
Equus caballus
ENSECAG00000026917
I
0.857
ENSLOCG00000008977
Lepisosteus oculatus
ENSLOCG00000008977
I
0.857
ENSONIG00000001158
Oreochromis niloticus
ENSONIG00000001158
I
0.856
ches1
Oryzias latipes
ENSORLG00000010729
I
0.856
ENSPFOG00000001305
Poecilia formosa
ENSPFOG00000001305
I
0.856
ches1
Takifugu rubripes
ENSTRUG00000003497
I
0.856
FOXN3
Monodelphis domestica
ENSMODG00000003001
I
0.834
gw.10.104.1
Branchiostoma floridae
gw.10.104.1
I
0.832
gw.384.13.1
Branchiostoma floridae
gw.384.13.1
I
0.832
ENSBTAG00000046684
Bos taurus
ENSBTAG00000046684
I
0.828
CGI_10011126
Crassostrea gigas
CGI_10011126
I
0.817
CapteG102038
Capitella teleta
CapteG102038
I
0.806
FOXN3
Pteropus vampyrus
ENSPVAG00000002967
I
0.798
LotgiG138633
Lottia gigantea
LotgiG138633
I
0.788
GB45298
Apis mellifera
GB45298
I
0.787
NEMVEDRAFT_v1g67209
Nematostella vectensis
NEMVEDRAFT_v1g67209
D
0.787
NV15444
Nasonia vitripennis
NV15444
I
0.787
SINV12530
Solenopsis invicta
SINV12530
I
0.787
Cflo_06973--XP_625198.2_APIME
Camponotus floridanus
Cflo_06973--XP_625198.2_APIME
I
0.787
Hsal_12079--XP_625198.2_APIME
Harpegnathos saltator
Hsal_12079--XP_625198.2_APIME
I
0.787
Sakowv30028653m.g
Saccoglossus kowalevskii
Sakowv30028653m.g
I
0.784
Myotis_brandtii_FOXN3_10022354
Myotis brandtii
Myotis_brandtii_FOXN3_10022354
I
0.782
ENSOARG00000003363
Ovis aries
ENSOARG00000003363
I
0.781
L798_02484
Zootermopsis nevadensis
L798_02484
I
0.779
BGLB008394
Biomphalaria glabrata
BGLB008394
I
0.777
ACYPI005943
Acyrthosiphon pisum
ACYPI005943
I
0.773
PHUM603440
Pediculus humanus
PHUM603440
I
0.765
HMEL010214
Heliconius melpomene
HMEL010214
I
0.764
KGM_12006
Danaus plexippus
KGM_12006
I
0.764
ENSXMAG00000001667
Xiphophorus maculatus
ENSXMAG00000001667
I
0.762
ENSPFOG00000015286
Poecilia formosa
ENSPFOG00000015286
I
0.759
ENSCAFG00000017486
Canis familiaris
ENSCAFG00000017486
I
0.757
ENSTNIG00000009703
Tetraodon nigroviridis
ENSTNIG00000009703
I
0.755
ENSCJAG00000034742
Callithrix jacchus
ENSCJAG00000034742
I
0.754
foxn2b
Oryzias latipes
ENSORLG00000011005
I
0.754
foxn2b
Tetraodon nigroviridis
ENSTNIG00000016601
I
0.754
foxn2b
Takifugu rubripes
ENSTRUG00000013724
I
0.754
ENSCJAG00000033311
Callithrix jacchus
ENSCJAG00000033311
I
0.750
ENSPMAG00000007171
Petromyzon marinus
ENSPMAG00000007171
I
0.750
ENSAMXG00000001149
Astyanax mexicanus
ENSAMXG00000001149
I
0.748
CABZ01056727.1
Danio rerio
ENSDARG00000055574
I
0.748
ENSPFOG00000021830
Poecilia formosa
ENSPFOG00000021830
I
0.745
ENSXMAG00000013148
Xiphophorus maculatus
ENSXMAG00000013148
I
0.745
ENSAMXG00000008216
Astyanax mexicanus
ENSAMXG00000008216
I
0.743
foxn2b
Gasterosteus aculeatus
ENSGACG00000005486
I
0.743
ENSOANG00000003851
Ornithorhynchus anatinus
ENSOANG00000003851
I
0.743
ENSONIG00000009856
Oreochromis niloticus
ENSONIG00000009856
I
0.743
SPU_015243
Strongylocentrotus purpuratus
SPU_015243
I
0.742
ENSCJAG00000032477
Callithrix jacchus
ENSCJAG00000032477
I
0.741
YQE_02614
Dendroctonus ponderosae
YQE_02614
I
0.741
YQE_02630
Dendroctonus ponderosae
YQE_02630
I
0.741
YQE_03399
Dendroctonus ponderosae
YQE_03399
I
0.741
Foxn2
Dipodomys ordii
ENSDORG00000007020
I
0.739
ENSFALG00000011112
Ficedula albicollis
ENSFALG00000011112
I
0.739
ENSGACG00000017049
Gasterosteus aculeatus
ENSGACG00000017049
I
0.735
FOXN2
Anolis carolinensis
ENSACAG00000014236
I
0.734
ENSAPLG00000016372
Anas platyrhynchos
ENSAPLG00000016372
I
0.734
FOXN2
Meleagris gallopavo
ENSMGAG00000005062
I
0.734
Ogr07715
Ophisaurus gracilis
Ogr07715
I
0.734
foxn2b
Danio rerio
ENSDARG00000045105
I
0.732
tetur19g01540
Tetranychus urticae
tetur19g01540
I
0.730
ENSGMOG00000016028
Gadus morhua
ENSGMOG00000016028
I
0.727
ACEP19737
Atta cephalotes
ACEP19737
I
0.725
FOXN2
Equus caballus
ENSECAG00000008390
I
0.724
ENSLOCG00000016292
Lepisosteus oculatus
ENSLOCG00000016292
I
0.724
FOXN2
Oryctolagus cuniculus
ENSOCUG00000009784
I
0.724
ENSAMEG00000006413
Ailuropoda melanoleuca
ENSAMEG00000006413
I
0.723
FOXN2
Bos taurus
ENSBTAG00000015151
I
0.723
FOXN2
Canis familiaris
ENSCAFG00000029603
I
0.723
FOXN2
Callithrix jacchus
ENSCJAG00000010894
I
0.723
ENSCPOG00000026162
Cavia porcellus
ENSCPOG00000026162
I
0.723
ENSCSAG00000013601
Chlorocebus sabaeus
ENSCSAG00000013601
I
0.723
FOXN2
Dasypus novemcinctus
ENSDNOG00000035609
I
0.723
FOXN2
Erinaceus europaeus
ENSEEUG00000015228
I
0.723
FOXN2
Echinops telfairi
ENSETEG00000007413
I
0.723
FOXN2
Felis catus
ENSFCAG00000022828
I
0.723
FOXN2
Homo sapiens
ENSG00000170802
D
0.723
FOXN2
Gorilla gorilla
ENSGGOG00000008171
I
0.723
FOXN2
Loxodonta africana
ENSLAFG00000012466
I
0.723
ENSMEUG00000000214
Macropus eugenii
ENSMEUG00000000214
I
0.723
FOXN2
Myotis lucifugus
ENSMLUG00000017567
I
0.723
FOXN2
Macaca mulatta
ENSMMUG00000020677
I
0.723
FOXN2
Monodelphis domestica
ENSMODG00000001169
I
0.723
ENSMPUG00000010993
Mustela putorius furo
ENSMPUG00000010993
I
0.723
Foxn2
Mus musculus
ENSMUSG00000034998
I
0.723
ENSNLEG00000008649
Nomascus leucogenys
ENSNLEG00000008649
I
0.723
ENSOARG00000004763
Ovis aries
ENSOARG00000004763
I
0.723
FOXN2
Otolemur garnettii
ENSOGAG00000011745
I
0.723
ENSPANG00000013263
Papio anubis
ENSPANG00000013263
I
0.723
FOXN2
Procavia capensis
ENSPCAG00000005254
I
0.723
ENSPPYG00000012423
Pongo abelii
ENSPPYG00000012423
I
0.723
FOXN2
Pan troglodytes
ENSPTRG00000011908
I
0.723
Foxn2
Rattus norvegicus
ENSRNOG00000040110
I
0.723
FOXN2
Sorex araneus
ENSSARG00000003696
I
0.723
ENSSHAG00000001461
Sarcophilus harrisii
ENSSHAG00000001461
I
0.723
FOXN2
Sus scrofa
ENSSSCG00000029593
I
0.723
ENSSTOG00000000862
Ictidomys tridecemlineatus
ENSSTOG00000000862
I
0.723
ENSTSYG00000014704
Tarsius syrichta
ENSTSYG00000014704
I
0.723
FOXN2
Vicugna pacos
ENSVPAG00000009218
I
0.723
ENSP00000343633
Macaca fascicularis
ENSP00000343633
I
0.723
ENSP00000394031-D1
Bos grunniens
ENSP00000394031-D1
I
0.723
Myotis_brandtii_FOXN2_10033482
Myotis brandtii
Myotis_brandtii_FOXN2_10033482
I
0.723
Pvit_15105
Pogona vitticeps
Pvit_15105
I
0.723
foxn2
Xenopus tropicalis
XB-GENE-952918
I
0.723
ENSLACG00000013808
Latimeria chalumnae
ENSLACG00000013808
I
0.719
foxn2.S
Xenopus laevis
XB-GENE-952923
I
0.719
ENSGMOG00000018188
Gadus morhua
ENSGMOG00000018188
I
0.718
ENSTNIG00000002057
Tetraodon nigroviridis
ENSTNIG00000002057
I
0.713
TC030764
Tribolium castaneum
TC030764
I
0.712
si:ch211-145o7.3
Danio rerio
ENSDARG00000061548
I
0.711
DAPPUDRAFT_8207
Daphnia pulex
DAPPUDRAFT_8207
I
0.710
ENSLOCG00000000880
Lepisosteus oculatus
ENSLOCG00000000880
I
0.705
ML077613a
Mnemiopsis leidyi
ML077613a
I
0.704
ENSLACG00000006234
Latimeria chalumnae
ENSLACG00000006234
I
0.703
Aqu1.218417
Amphimedon queenslandica
Aqu1.218417
I
0.694
Ocbimv22027168m.g
Octopus bimaculoides
Ocbimv22027168m.g
I
0.694
CpipJ_CPIJ002020
Culex pipiens
CpipJ_CPIJ002020
I
0.693
AAEL008832
Aedes aegypti
AAEL008832
I
0.693
CPIJ002020
Culex quinquefasciatus
CPIJ002020
I
0.693
AFAF006655
Anopheles farauti
AFAF006655
I
0.693
AGAP013178
Anopheles gambiae
AGAP013178
I
0.692
ENSGMOG00000003346
Gadus morhua
ENSGMOG00000003346
I
0.692
AARA006907
Anopheles arabiensis
AARA006907
I
0.692
AATE000717
Anopheles atroparvus
AATE000717
I
0.692
ACUA012004
Anopheles culicifacies
ACUA012004
I
0.692
ADIR002427
Anopheles dirus
ADIR002427
I
0.692
AFUN001697
Anopheles funestus
AFUN001697
I
0.692
AMAM012648
Anopheles maculatus
AMAM012648
I
0.692
AMEC021917
Anopheles melas
AMEC021917
I
0.692
AMIN003345
Anopheles minimus
AMIN003345
I
0.692
AQUA002332
Anopheles quadriannulatus
AQUA002332
I
0.692
ASIS003979
Anopheles sinensis
ASIS003979
I
0.692
ASTEI05563
Anopheles stephensi
ASTEI05563
I
0.692
LLOJ006903
Lutzomyia longipalpis
LLOJ006903
I
0.692
LCUP017282
Lucilia cuprina
LCUP017282
I
0.690
MDOA011809
Musca domestica
MDOA011809
I
0.690
BGIBMGA008311
Bombyx mori
BGIBMGA008311
I
0.689
ADAC006994
Anopheles darlingi
ADAC006994
I
0.688
AALB008878
Anopheles albimanus
AALB008878
I
0.688
CHES-1-like
Drosophila melanogaster
FBgn0029504
D
0.686
GF21122
Drosophila ananassae
FBgn0098127
I
0.686
GG17614
Drosophila erecta
FBgn0109837
I
0.686
GH12836
Drosophila grimshawi
FBgn0120315
I
0.686
GI14920
Drosophila mojavensis
FBgn0137671
I
0.686
GL14605
Drosophila persimilis
FBgn0152210
I
0.686
GM17463
Drosophila sechellia
FBgn0172373
I
0.686
GJ18953
Drosophila virilis
FBgn0206099
I
0.686
GK19775
Drosophila willistoni
FBgn0221773
I
0.686
GE17515
Drosophila yakuba
FBgn0234975
I
0.686
GA27773
Drosophila pseudoobscura
FBgn0249137
I
0.686
FOXN2
Pteropus vampyrus
ENSPVAG00000003737
I
0.682
foxn2/3
Ciona intestinalis
ENSCING00000001109
I
0.681
FOXN2
Choloepus hoffmanni
ENSCHOG00000000109
I
0.680
FOXN2
Ochotona princeps
ENSOPRG00000007661
I
0.678
CLEC003208
Cimex lectularius
CLEC003208
I
0.678
ENSCSAVG00000007298
Ciona savignyi
ENSCSAVG00000007298
I
0.677
SMAR014430
Strigamia maritima
SMAR014430
I
0.673
ENSCJAG00000033966
Callithrix jacchus
ENSCJAG00000033966
I
0.669
ENSGGOG00000016732
Gorilla gorilla
ENSGGOG00000016732
I
0.667
TriadG17577
Trichoplax adhaerens
TriadG17577
D
0.664