CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK20670.1
(
Cannabis sativa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
PK20670.1
T203255_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK20670.1
GRAS
169
546
AEQLLNPCATAITEGNCMRVQHLLYVLHELASLTGDANHRLAFHGLRALTHHLSSSPSVSAPAAGCVTFSTAEPRFFQKSLIKLSEVSPWFAFPNNITNSCILQLLNEENDRTRSLHILDIGVSHGIQWPILLEALSRRLGGPPPLVRITIIAGTDQNNDTAFSKGPPGDNFSTRLLIYAKSININLEINRLDNQPLQNLNAQIINSSEDETLIICAQFRLHHLNHNTPNERTEFLKTLRKMEPKGIILSENNTECSCSNCGNFACGFSRKVEYLWRFLESTSSAFKGRESEERRLMEGEAAKGLTNRGEMNEGKEKWCERMRGAGFMGESFGEEAIDGGRALLRKYDSNWEMRVEEKDGFVGLWWKGQPVSFCSLWK
Links
Other
GRAS
family TFs
Other
Cannabis sativa
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava2753.m1
Manihot esculenta
cassava2753.m1
N
0.744
cassava34800.m1
Manihot esculenta
cassava34800.m1
N
0.763
Ca_10004
Cicer arietinum
Ca_10004
N
0.734
chr5.CM0569.130.nd
Lotus japonicus
chr5.CM0569.130.nd
N
0.714
evm.TU.supercontig_25.124
Carica papaya
evm.TU.supercontig_25.124
N
0.725
gene25548-v1.0-hybrid
Fragaria vesca
gene25548-v1.0-hybrid
N
0.749
GLYMA07G04430
Glycine max
GLYMA07G04430
N
0.716
GLYMA16G01020
Glycine max
GLYMA16G01020
N
0.705
Gorai.011G058900
Gossypium raimondii
Gorai.011G058900
N
0.752
MDP0000308434
Malus domestica
MDP0000308434
N
0.769
MTR_8g020840
Medicago truncatula
MTR_8g020840
N
0.716
orange1.1g008559m.g
Citrus sinensis
orange1.1g008559m.g
N
0.747
PGSC0003DMG400039263
Solanum tuberosum
PGSC0003DMG400039263
N
0.727
Pm013263
Prunus mume
Pm013263
N
0.782
POPTR_0001s16890
Populus trichocarpa
POPTR_0001s16890
N
0.760
POPTR_0003s06380
Populus trichocarpa
POPTR_0003s06380
N
0.752
PRUPE_ppa022653mg
Prunus persica
PRUPE_ppa022653mg
N
0.788
SapurV1A.0002s0940
Salix purpurea
SapurV1A.0002s0940
N
0.758
Solyc03g123400.1
Solanum lycopersicum
Solyc03g123400.1
N
0.730
TCM_029136
Theobroma cacao
TCM_029136
N
0.769
VIT_09s0002g01190
Vitis vinifera
VIT_09s0002g01190
N
0.774