CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjT15C06.70.nc
(
Lotus japonicus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
LjT15C06.70.nc
T203321_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjT15C06.70.nc
GRAS
101
485
LVHLLMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTDALQGLLDGAAGAHNLNKNSVVAGPHREDPQTDMLAAFQLLQDMSPYIKFAHFTANQAILEAVAHERRVHIIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALSRSCGRGGGRRSIATVQETGRRLTAFAASVGQPFSFHQCRLDPDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAPDSIASFLSGARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWARGLVERVFLGPRITSSVARLYRTGEEDEEGSGSWGEWLVASGFRGVPISFTNHCQAKLLLGLFNDGYRVEELSNNKLVLSWKSRRLLSASVWT
Links
Other
GRAS
family TFs
Other
Lotus japonicus
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00006p00259200
Amborella trichopoda
AMTR_s00006p00259200
I
0.000
BGIOSGA007184
Oryza indica
BGIOSGA007184
N
0.000
BRADI3G02980
Brachypodium distachyon
BRADI3G02980
N
0.000
F775_12975
Aegilops tauschii
F775_12975
N
0.000
GRMZM2G361611
Zea mays
GRMZM2G361611
N
0.000
GRMZM2G444748
Zea mays
GRMZM2G444748
N
0.000
gw1.83.117.1
Physcomitrella patens
gw1.83.117.1
I
0.000
MLOC_63436
Hordeum vulgare
MLOC_63436
N
0.000
OBART02G02570
Oryza barthii
OBART02G02570
N
0.000
OGLUM02G02590
Oryza glumaepatula
OGLUM02G02590
N
0.000
ONIVA02G02510
Oryza nivara
ONIVA02G02510
N
0.000
OPUNC02G02000
Oryza punctata
OPUNC02G02000
N
0.000
ORGLA02G0024700
Oryza glaberrima
ORGLA02G0024700
N
0.000
ORUFI02G02580
Oryza rufipogon
ORUFI02G02580
N
0.000
OS02G0132500
Oryza sativa
OS02G0132500
N
0.000
Sb04g002700
Sorghum bicolor
Sb04g002700
N
0.000
Traes_6AS_FDF16F4EA
Triticum aestivum
Traes_6AS_FDF16F4EA
N
0.000