AMTR_s00006p00259200 (Amborella trichopoda)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 AMTR_s00006p00259200 T056740_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATBZIP42
M06775_2.00 		Arabidopsis thaliana
TGCTGACGTGGM
KCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_col_a 		0.807 0.672
ATBZIP42
M06776_2.00 		Arabidopsis thaliana
TGCTGACGTGGCV
BGCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a 		0.807 0.672
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN05815 bZIP 60 120

Links

Other bZIP family TFs
Other Amborella trichopoda TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10002068m.g Capsella rubella Carubv10002068m.g I 0.812
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.808
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.807
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.805
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.802
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I 0.798
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I 0.798
Bra023540 Brassica rapa Bra023540 I 0.797
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I 0.797
Bo9g163740 Brassica oleracea Bo9g163740 I 0.796
Bra008670 Brassica rapa Bra008670 I 0.796
Bo2g012800 Brassica oleracea Bo2g012800 I 0.793
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I 0.793
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I 0.793
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.793
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I 0.793
Pm015434 Prunus mume Pm015434 I 0.793
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.793
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.793
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I 0.793
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I 0.793
mgf017392m Mimulus guttatus mgf017392m I 0.789
Bo3g010620 Brassica oleracea Bo3g010620 I 0.788
GSMUA_Achr9G14690_001 Musa acuminata GSMUA_Achr9G14690_001 I 0.787
Cla016748 Citrullus lanatus Cla016748 I 0.787
Cla020641 Citrullus lanatus Cla020641 I 0.787
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.787
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.787
Bo3g010750 Brassica oleracea Bo3g010750 I 0.786
Bra006324 Brassica rapa Bra006324 I 0.786
Ca_15971 Cicer arietinum Ca_15971 N 0.786
mgf021986m Mimulus guttatus mgf021986m I 0.786
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.786
PK07533.1 Cannabis sativa PK07533.1 I 0.786
BGIOSGA007184 Oryza indica BGIOSGA007184 N 0.785
OBART02G02570 Oryza barthii OBART02G02570 N 0.785
OGLUM02G02590 Oryza glumaepatula OGLUM02G02590 N 0.785
ONIVA02G02510 Oryza nivara ONIVA02G02510 N 0.785
OPUNC02G02000 Oryza punctata OPUNC02G02000 N 0.785
ORGLA02G0024700 Oryza glaberrima ORGLA02G0024700 N 0.785
ORUFI02G02580 Oryza rufipogon ORUFI02G02580 N 0.785
OS02G0132500 Oryza sativa OS02G0132500 N 0.785
Sb04g002700 Sorghum bicolor Sb04g002700 N 0.785
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.784
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.784
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.784
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.784
VIT_18s0001g13040 Vitis vinifera VIT_18s0001g13040 N 0.784
30138.m003866 Ricinus communis 30138.m003866 I 0.784
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.784
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.784
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.784
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.784
MDP0000863909 Malus domestica MDP0000863909 I 0.784
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.784
BRADI3G02980 Brachypodium distachyon BRADI3G02980 N 0.783
F775_12975 Aegilops tauschii F775_12975 N 0.783
GLYMA06G01240 Glycine max GLYMA06G01240 I 0.783
GRMZM2G444748 Zea mays GRMZM2G444748 N 0.783
GSMUA_Achr10G20720_001 Musa acuminata GSMUA_Achr10G20720_001 I 0.783
MLOC_63436 Hordeum vulgare MLOC_63436 N 0.783
Traes_6AS_FDF16F4EA Triticum aestivum Traes_6AS_FDF16F4EA N 0.783
Ca_09362 Cicer arietinum Ca_09362 I 0.783
Lus10011722.g Linum usitatissimum Lus10011722.g I 0.783
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.782
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I 0.782
30131.m007078 Ricinus communis 30131.m007078 I 0.782
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.782
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.782
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I 0.782