PGSC0003DMG400001916 (Solanum tuberosum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 PGSC0003DMG400001916 T066473_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATBZIP42
M06775_2.00 		Arabidopsis thaliana
TGCTGACGTGGM
KCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_col_a 		0.846 0.778
ATBZIP42
M06776_2.00 		Arabidopsis thaliana
TGCTGACGTGGCV
BGCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a 		0.846 0.778
OS02G0266800
M10046_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RITA1_01 		0.804 0.476
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400004821 bZIP 83 145

Links

Other bZIP family TFs
Other Solanum tuberosum TFs

159 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I 0.894
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.880
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I 0.879
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I 0.879
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.866
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.866
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.866
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.866
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.866
30138.m003866 Ricinus communis 30138.m003866 I 0.866
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.864
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.863
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.861
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.861
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.861
PGSC0003DMG400007523 Solanum tuberosum PGSC0003DMG400007523 I 0.860
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.860
MDP0000183562 Malus domestica MDP0000183562 I 0.851
MDP0000891108 Malus domestica MDP0000891108 I 0.851
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I 0.850
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.847
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.847
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.847
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.847
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I 0.846
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I 0.846
Bo2g012800 Brassica oleracea Bo2g012800 I 0.846
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.846
mgf017392m Mimulus guttatus mgf017392m I 0.846
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.845
Cla016748 Citrullus lanatus Cla016748 I 0.845
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.844
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.841
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.841
Cla005975 Citrullus lanatus Cla005975 I 0.841
Cla020641 Citrullus lanatus Cla020641 I 0.841
Carubv10002068m.g Capsella rubella Carubv10002068m.g I 0.836
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I 0.836
Bra023540 Brassica rapa Bra023540 I 0.836
Bo9g163740 Brassica oleracea Bo9g163740 I 0.835
Bra008670 Brassica rapa Bra008670 I 0.835
mgf021986m Mimulus guttatus mgf021986m I 0.834
Pm015434 Prunus mume Pm015434 I 0.832
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.832
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.832
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.832
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.832
Ca_09362 Cicer arietinum Ca_09362 I 0.829
Bo3g010620 Brassica oleracea Bo3g010620 I 0.827
Bra006324 Brassica rapa Bra006324 I 0.825
Bo3g010750 Brassica oleracea Bo3g010750 I 0.825
MDP0000863909 Malus domestica MDP0000863909 I 0.823
MTR_8g015250 Medicago truncatula MTR_8g015250 I 0.823
MDP0000891899 Malus domestica MDP0000891899 I 0.822
GLYMA01G40370 Glycine max GLYMA01G40370 I 0.822
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.821
GLYMA17G17100 Glycine max GLYMA17G17100 I 0.821
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I 0.820
Lus10011722.g Linum usitatissimum Lus10011722.g I 0.820
MTR_5g015090 Medicago truncatula MTR_5g015090 I 0.820
mgf003466m Mimulus guttatus mgf003466m I 0.819
Solyc03g046440.1 Solanum lycopersicum Solyc03g046440.1 I 0.818
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.818
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I 0.818
30131.m007078 Ricinus communis 30131.m007078 I 0.817
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.817
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.816
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.816
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.816
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.816
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.816
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.813
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.813
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.813
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I 0.812
Ca_15971 Cicer arietinum Ca_15971 N 0.811
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.811
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.809
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.809
Ca_17416 Cicer arietinum Ca_17416 I 0.808
MTR_4g097440 Medicago truncatula MTR_4g097440 I 0.808
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.807
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.807
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.807
Pm002353 Prunus mume Pm002353 I 0.807
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.807
TCM_000835 Theobroma cacao TCM_000835 I 0.806
LPERR02G04950 Leersia perrieri LPERR02G04950 I 0.806
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I 0.804
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I 0.804
OMERI02G12230 Oryza meridionalis OMERI02G12230 I 0.804
OPUNC02G10230 Oryza punctata OPUNC02G10230 I 0.804
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I 0.804
ONIVA02G12920 Oryza nivara ONIVA02G12920 I 0.804
ONIVA02G06040 Oryza nivara ONIVA02G06040 I 0.804
OBART02G05680 Oryza barthii OBART02G05680 I 0.804
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I 0.804
BGIOSGA007649 Oryza indica BGIOSGA007649 I 0.804
BGIOSGA006734 Oryza indica BGIOSGA006734 I 0.804
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I 0.804
GRMZM2G098904 Zea mays GRMZM2G098904 I 0.804
OBART02G11580 Oryza barthii OBART02G11580 I 0.804
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I 0.804
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I 0.804
OMERI02G06470 Oryza meridionalis OMERI02G06470 I 0.804
Sb04g005020 Sorghum bicolor Sb04g005020 I 0.804
OS02G0266800 Oryza sativa OS02G0266800 D 0.804
OS02G0175100 Oryza sativa OS02G0175100 I 0.804
Si017778m.g Setaria italica Si017778m.g I 0.804
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I 0.804
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.803
PK07533.1 Cannabis sativa PK07533.1 I 0.803
VIT_05s0077g01140 Vitis vinifera VIT_05s0077g01140 I 0.801
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I 0.801
MDP0000239026 Malus domestica MDP0000239026 I 0.799
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I 0.799
Cla016841 Citrullus lanatus Cla016841 I 0.798
Cla008074 Citrullus lanatus Cla008074 I 0.797
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.797
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I 0.797
mgf007535m Mimulus guttatus mgf007535m I 0.796
Bra020620 Brassica rapa Bra020620 I 0.796
mgf013074m Mimulus guttatus mgf013074m I 0.796
MDP0000205823 Malus domestica MDP0000205823 I 0.795
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.794
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.794
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.793
AMTR_s00006p00259200 Amborella trichopoda AMTR_s00006p00259200 I 0.793
Gorai.007G056900 Gossypium raimondii Gorai.007G056900 I 0.792
Gorai.007G277300 Gossypium raimondii Gorai.007G277300 I 0.792
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I 0.792
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I 0.792
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I 0.792
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I 0.791
evm.TU.supercontig_129.74 Carica papaya evm.TU.supercontig_129.74 I 0.790
Pavir.Bb02514 Panicum virgatum Pavir.Bb02514 I 0.789
Pavir.Ba01782 Panicum virgatum Pavir.Ba01782 I 0.789
GSMUA_Achr9G14690_001 Musa acuminata GSMUA_Achr9G14690_001 I 0.789
MDP0000738631 Malus domestica MDP0000738631 I 0.789
Si031238m.g Setaria italica Si031238m.g I 0.789
GLYMA06G01240 Glycine max GLYMA06G01240 I 0.788
evm.TU.supercontig_53.3 Carica papaya evm.TU.supercontig_53.3 N 0.788
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.787
Bra010010 Brassica rapa Bra010010 I 0.787
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I 0.787
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I 0.787
Cla015037 Citrullus lanatus Cla015037 I 0.785
PDK_20s1417191g003 Phoenix dactylifera PDK_20s1417191g003 I 0.785
Cucsa.388800 Cucumis sativus Cucsa.388800 I 0.785
orange1.1g042014m.g Citrus sinensis orange1.1g042014m.g I 0.785
Ciclev10013334m.g Citrus clementina Ciclev10013334m.g I 0.785
mgf018581m Mimulus guttatus mgf018581m I 0.784
MDP0000261154 Malus domestica MDP0000261154 N 0.784
28976.m000155 Ricinus communis 28976.m000155 N 0.783
Si019897m.g Setaria italica Si019897m.g I 0.783
GSMUA_Achr1G25340_001 Musa acuminata GSMUA_Achr1G25340_001 I 0.783
PGSC0003DMG400003701 Solanum tuberosum PGSC0003DMG400003701 I 0.783
GSMUA_Achr5G05350_001 Musa acuminata GSMUA_Achr5G05350_001 I 0.783
POPTR_0017s14490 Populus trichocarpa POPTR_0017s14490 I 0.782