Ciclev10032777m.g (Citrus clementina)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Ciclev10032777m.g T071659_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATBZIP42
M06775_2.00 		Arabidopsis thaliana
TGCTGACGTGGM
KCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_col_a 		0.860 0.839
ATBZIP42
M06776_2.00 		Arabidopsis thaliana
TGCTGACGTGGCV
BGCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a 		0.860 0.839
OS02G0266800
M10046_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RITA1_01 		0.790 0.452
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10032777m bZIP 83 144

Links

Other bZIP family TFs
Other Citrus clementina TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I 0.894
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.880
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.880
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.880
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.880
30138.m003866 Ricinus communis 30138.m003866 I 0.880
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.880
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I 0.879
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I 0.879
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.878
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.878
PGSC0003DMG400007523 Solanum tuberosum PGSC0003DMG400007523 I 0.874
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.874
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.866
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.861
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.861
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.861
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.861
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.860
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.858
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.855
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.855
Cla020641 Citrullus lanatus Cla020641 I 0.855
Cla005975 Citrullus lanatus Cla005975 I 0.855
Bra023540 Brassica rapa Bra023540 I 0.850
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I 0.850
Bo9g163740 Brassica oleracea Bo9g163740 I 0.849
Bra008670 Brassica rapa Bra008670 I 0.849
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.847
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.847
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.847
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.846
Pm015434 Prunus mume Pm015434 I 0.846
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.846
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.846
Bo3g010620 Brassica oleracea Bo3g010620 I 0.841
Bo2g012800 Brassica oleracea Bo2g012800 I 0.841
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I 0.841
Carubv10002068m.g Capsella rubella Carubv10002068m.g I 0.841
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I 0.841
Bo3g010750 Brassica oleracea Bo3g010750 I 0.839
Bra006324 Brassica rapa Bra006324 I 0.839
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.837
MDP0000891108 Malus domestica MDP0000891108 I 0.837
MDP0000863909 Malus domestica MDP0000863909 I 0.837
MDP0000183562 Malus domestica MDP0000183562 I 0.837
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I 0.836
mgf021986m Mimulus guttatus mgf021986m I 0.834
Ca_09362 Cicer arietinum Ca_09362 I 0.834
Solyc03g046440.1 Solanum lycopersicum Solyc03g046440.1 I 0.832
mgf017392m Mimulus guttatus mgf017392m I 0.832
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.830
Cla016748 Citrullus lanatus Cla016748 I 0.830
GLYMA17G17100 Glycine max GLYMA17G17100 I 0.826
GLYMA01G40370 Glycine max GLYMA01G40370 I 0.826
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.826
MTR_5g015090 Medicago truncatula MTR_5g015090 I 0.825
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I 0.825
Lus10011722.g Linum usitatissimum Lus10011722.g I 0.824
MTR_8g015250 Medicago truncatula MTR_8g015250 I 0.823
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.823
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I 0.818
mgf003466m Mimulus guttatus mgf003466m I 0.814
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.813
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.813
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.812
MTR_4g097440 Medicago truncatula MTR_4g097440 I 0.812
30131.m007078 Ricinus communis 30131.m007078 I 0.812
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.812
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.812
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.811
Ca_15971 Cicer arietinum Ca_15971 N 0.811
Cla008074 Citrullus lanatus Cla008074 I 0.811
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.811
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.811
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.811
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.811
TCM_000835 Theobroma cacao TCM_000835 I 0.811
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.811
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.811
Pm002353 Prunus mume Pm002353 I 0.811
MDP0000891899 Malus domestica MDP0000891899 I 0.808
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.808
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I 0.807
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I 0.806
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.804
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.804
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.802
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I 0.799
AMTR_s00006p00259200 Amborella trichopoda AMTR_s00006p00259200 I 0.798
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.798
PK07533.1 Cannabis sativa PK07533.1 I 0.798
Si019897m.g Setaria italica Si019897m.g I 0.797
MDP0000239026 Malus domestica MDP0000239026 I 0.795
PDK_20s1520551g003 Phoenix dactylifera PDK_20s1520551g003 I 0.794
GSMUA_Achr9G14690_001 Musa acuminata GSMUA_Achr9G14690_001 I 0.794
evm.TU.supercontig_129.74 Carica papaya evm.TU.supercontig_129.74 I 0.794
Ca_17416 Cicer arietinum Ca_17416 I 0.794
Cla016841 Citrullus lanatus Cla016841 I 0.793
MDP0000738631 Malus domestica MDP0000738631 I 0.793
Bra020620 Brassica rapa Bra020620 I 0.792
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.792
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I 0.792
Gorai.007G056900 Gossypium raimondii Gorai.007G056900 I 0.792
LPERR02G04950 Leersia perrieri LPERR02G04950 I 0.792
mgf013074m Mimulus guttatus mgf013074m I 0.791
GRMZM2G020799 Zea mays GRMZM2G020799 I 0.791
mgf007535m Mimulus guttatus mgf007535m I 0.791
OBART02G11580 Oryza barthii OBART02G11580 I 0.790
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I 0.790
MDP0000205823 Malus domestica MDP0000205823 I 0.790
Sb04g005020 Sorghum bicolor Sb04g005020 I 0.790
Si017778m.g Setaria italica Si017778m.g I 0.790
OMERI02G06470 Oryza meridionalis OMERI02G06470 I 0.790
OS02G0175100 Oryza sativa OS02G0175100 I 0.790
ONIVA02G12920 Oryza nivara ONIVA02G12920 I 0.790
GSMUA_Achr6G36230_001 Musa acuminata GSMUA_Achr6G36230_001 I 0.790
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I 0.790
ONIVA02G06040 Oryza nivara ONIVA02G06040 I 0.790
BGIOSGA006734 Oryza indica BGIOSGA006734 I 0.790
BGIOSGA007649 Oryza indica BGIOSGA007649 I 0.790
OBART02G05680 Oryza barthii OBART02G05680 I 0.790
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I 0.790
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I 0.790
OMERI02G12230 Oryza meridionalis OMERI02G12230 I 0.790
OS02G0266800 Oryza sativa OS02G0266800 D 0.790
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I 0.790
GRMZM2G098904 Zea mays GRMZM2G098904 I 0.790
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I 0.790
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I 0.790
OPUNC02G10230 Oryza punctata OPUNC02G10230 I 0.790
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I 0.790
Pavir.Ba01782 Panicum virgatum Pavir.Ba01782 I 0.789
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.789
Pavir.Bb02514 Panicum virgatum Pavir.Bb02514 I 0.789
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.789
Si031238m.g Setaria italica Si031238m.g I 0.789
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I 0.788
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I 0.788
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I 0.788
evm.TU.supercontig_53.3 Carica papaya evm.TU.supercontig_53.3 N 0.788
Gorai.007G277300 Gossypium raimondii Gorai.007G277300 I 0.788
GLYMA06G01240 Glycine max GLYMA06G01240 I 0.788
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.788
VIT_05s0077g01140 Vitis vinifera VIT_05s0077g01140 I 0.787
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I 0.787
Bra010010 Brassica rapa Bra010010 I 0.787
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I 0.787
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I 0.786
Ciclev10013334m.g Citrus clementina Ciclev10013334m.g I 0.785
orange1.1g042014m.g Citrus sinensis orange1.1g042014m.g I 0.785
MDP0000261154 Malus domestica MDP0000261154 N 0.784
28976.m000155 Ricinus communis 28976.m000155 N 0.783
Gorai.008G085200 Gossypium raimondii Gorai.008G085200 I 0.783
POPTR_0017s14490 Populus trichocarpa POPTR_0017s14490 I 0.782
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.782