CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo9g006450
(
Brassica oleracea
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
Bo9g006450
T204992_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK25011.1
M01253_2.00
Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN
PBM
Lambert et al.(2019)
pTH11258
0.674
0.789
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g006450.1
Homeodomain
20
76
SKKRKLKTPMQVMALENFYNEHKYPSEEMKAKIAEEIGLTEKQVSGWFCHRRLKDKR
Links
Other
Homeodomain
family TFs
Other
Brassica oleracea
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O7_09144
Cladophialophora yegresii
A1O7_09144
I
0.000
AB04837.1
Alternaria brassicicola
AB04837.1
I
0.000
AGABI2DRAFT_221018
Agaricus bisporus
AGABI2DRAFT_221018
I
0.000
AMAG_10934
Allomyces macrogynus
AMAG_10934
I
0.000
AMAG_11531
Allomyces macrogynus
AMAG_11531
I
0.000
BBA_03658
Beauveria bassiana
BBA_03658
I
0.000
Bcin16g00520
Botrytis cinerea
Bcin16g00520
I
0.000
BGHDH14_bgh02277
Blumeria graminis
BGHDH14_bgh02277
I
0.000
ACLA_068510
Aspergillus clavatus
CADACLAG00006604
I
0.000
AFUA_2G05830
Aspergillus fumigatus
CADAFUAG00003580
I
0.000
CADANGAG00002975
Aspergillus niger
CADANGAG00002975
I
0.000
ANIA_07468
Aspergillus nidulans
CADANIAG00000561
I
0.000
ATEG_06774
Aspergillus terreus
CADATEAG00009372
I
0.000
NFIA_082550
Neosartorya fischeri
CADNFIAG00007743
I
0.000
CC1G_03210
Coprinopsis cinerea
CC1G_03210
I
0.000
CCM_09384
Cordyceps militaris
CCM_09384
I
0.000
CERSUDRAFT_154783
Ceriporiopsis subvermispora
CERSUDRAFT_154783
I
0.000
CFIO01_13270
Colletotrichum fioriniae
CFIO01_13270
I
0.000
CGGC5_5160
Colletotrichum gloeosporioides
CGGC5_5160
I
0.000
CH063_04254
Colletotrichum higginsianum
CH063_04254
I
0.000
CHGG_09150
Chaetomium globosum
CHGG_09150
I
0.000
Cob_11782
Colletotrichum orbiculare
Cob_11782
I
0.000
COCMIDRAFT_34032
Bipolaris oryzae
COCMIDRAFT_34032
I
0.000
COCSADRAFT_324130
Bipolaris sorokiniana
COCSADRAFT_324130
I
0.000
CSUB01_01974
Colletotrichum sublineola
CSUB01_01974
I
0.000
CY34DRAFT_590075
Suillus luteus
CY34DRAFT_590075
I
0.000
DACRYDRAFT_20822
Dacryopinax sp
DACRYDRAFT_20822
I
0.000
estExt_fgeneshMC_kg.C_60018
Mucor circinelloides
estExt_fgeneshMC_kg.C_60018
I
0.000
estExt_fgeneshPB_pg.C_60303
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_60303
N
0.000
estExt_Genewise1.C_90411
Cryphonectria parasitica
estExt_Genewise1.C_90411
I
0.000
estExt_Genewise1.C_sca_2_chr3_3_00763
Nectria haematococca
estExt_Genewise1.C_sca_2_chr3_3_00763
I
0.000
EURHEDRAFT_378858
Aspergillus ruber
EURHEDRAFT_378858
I
0.000
F503_01793
Ophiostoma piceae uamh
F503_01793
I
0.000
FFUJ_06134
Fusarium fujikuroi
FFUJ_06134
I
0.000
fgenesh1_pm.00082_#_96
Aspergillus carbonarius
fgenesh1_pm.00082_#_96
I
0.000
fgeneshMC_pm.9_#_186
Mucor circinelloides
fgeneshMC_pm.9_#_186
I
0.000
fgeneshPB_pg.22__185
Phycomyces blakesleeanus
fgeneshPB_pg.22__185
I
0.000
fgeneshPB_pg.2__402
Phycomyces blakesleeanus
fgeneshPB_pg.2__402
I
0.000
FGRRES_08626
Fusarium graminearum
FGRRES_08626
I
0.000
FOXG_03173
Fusarium oxysporum
FOXG_03173
I
0.000
FPSE_06035
Fusarium pseudograminearum
FPSE_06035
I
0.000
FVEG_02042
Fusarium verticillioides
FVEG_02042
I
0.000
G647_09092
Cladophialophora carrionii
G647_09092
I
0.000
GALMADRAFT_535775
Galerina marginata
GALMADRAFT_535775
I
0.000
GLOINDRAFT_38994
Rhizophagus irregularis
GLOINDRAFT_38994
I
0.000
GLRG_05382
Colletotrichum graminicola
GLRG_05382
I
0.000
GMDG_01985
Pseudogymnoascus destructans
GMDG_01985
I
0.000
HMPREF1541_06157
Cyphellophora europaea
HMPREF1541_06157
I
0.000
K443DRAFT_671242
Laccaria amethystina
K443DRAFT_671242
I
0.000
LACBIDRAFT_399488
Laccaria bicolor
LACBIDRAFT_399488
I
0.000
M378DRAFT_10526
Amanita muscaria
M378DRAFT_10526
I
0.000
M404DRAFT_15475
Pisolithus tinctorius
M404DRAFT_15475
N
0.000
M413DRAFT_24478
Hebeloma cylindrosporum
M413DRAFT_24478
I
0.000
MBM_08140
Marssonina brunnea
MBM_08140
I
0.000
MPH_10014
Macrophomina phaseolina
MPH_10014
I
0.000
MYCTH_2306512
Myceliophthora thermophila
MYCTH_2306512
I
0.000
NechaG59099
Fusarium solani
NechaG59099
I
0.000
OIDMADRAFT_163726
Oidiodendron maius
OIDMADRAFT_163726
I
0.000
PaG_02922
Pseudozyma aphidis
PaG_02922
I
0.000
PAXRUDRAFT_830673
Paxillus rubicundulus
PAXRUDRAFT_830673
I
0.000
Pc22g08580
Penicillium chrysogenum
Pc22g08580
I
0.000
PCH_Pc22g08580
Penicillium rubens
PCH_Pc22g08580
I
0.000
PDE_03610
Penicillium oxalicum
PDE_03610
I
0.000
PDIP_87220
Penicillium digitatum
PDIP_87220
I
0.000
PEX1_005530
Penicillium expansum
PEX1_005530
I
0.000
PFL1_03021
Pseudozyma flocculosa
PFL1_03021
I
0.000
PGTG_09159
Puccinia graminis
PGTG_09159
D
0.000
PHACADRAFT_258404
Phanerochaete carnosa
PHACADRAFT_258404
I
0.000
PHLGIDRAFT_76307
Phlebiopsis gigantea
PHLGIDRAFT_76307
I
0.000
PHSY_000207
Pseudozyma hubeiensis
PHSY_000207
I
0.000
PILCRDRAFT_94123
Piloderma croceum
PILCRDRAFT_94123
I
0.000
PISMIDRAFT_7910
Pisolithus microcarpus
PISMIDRAFT_7910
N
0.000
PITC_045920
Penicillium italicum
PITC_045920
I
0.000
PLEOSDRAFT_1083727
Pleurotus ostreatus
PLEOSDRAFT_1083727
I
0.000
POSPLDRAFT_113058
Postia placenta
POSPLDRAFT_113058
I
0.000
PSEUBRA_SCAF2g02944
Pseudozyma brasiliensis
PSEUBRA_SCAF2g02944
I
0.000
PTRG_06536
Pyrenophora triticirepentis
PTRG_06536
I
0.000
PTTG_02951
Puccinia triticina
PTTG_02951
I
0.000
PTT_13315
Pyrenophora teres
PTT_13315
I
0.000
PV04_09754
Capronia semiimmersa
PV04_09754
I
0.000
PV10_04238
Exophiala mesophila
PV10_04238
I
0.000
RO3G_08081
Rhizopus oryzae
RO3G_08081
I
0.000
SBOR_4007
Sclerotinia borealis
SBOR_4007
I
0.000
SCHCODRAFT_257622
Schizophyllum commune
SCHCODRAFT_257622
I
0.000
SCLCIDRAFT_1208446
Scleroderma citrinum
SCLCIDRAFT_1208446
N
0.000
SERLA73DRAFT_72478
Serpula lacrymans
SERLA73DRAFT_72478
I
0.000
SETTUDRAFT_38779
Setosphaeria turcica
SETTUDRAFT_38779
I
0.000
SNOG_12336
Phaeosphaeria nodorum
SNOG_12336
I
0.000
SPPG_09179
Spizellomyces punctatus
SPPG_09179
I
0.000
sr10662
Sporisorium reilianum
sr10662
I
0.000
SS1G_02293
Sclerotinia sclerotiorum
SS1G_02293
I
0.000
THITE_2109877
Thielavia terrestris
THITE_2109877
I
0.000
U727_00433592471
Penicillium solitum
U727_00433592471
I
0.000
UCRNP2_700
Neofusicoccum parvum
UCRNP2_700
I
0.000
UM01925
Ustilago maydis
UM01925
I
0.000
V499_09136
Pseudogymnoascus pannorum
V499_09136
I
0.000
V565_004710
Rhizoctonia solani
V565_004710
I
0.000
VHEMI06855
Torrubiella hemipterigena
VHEMI06855
I
0.000
W97_07322
Coniosporium apollinis
W97_07322
I
0.000
WALSEDRAFT_61007
Wallemia sebi
WALSEDRAFT_61007
N
0.000