ENSAMXG00000008007 (Astyanax mexicanus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSAMXG00000008007 T207078_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Barx2
M00457_2.00 		Mus musculus
NTAABNDNN
NNHNVTTAN		 PBM
Berger et al.(2008)
Barx2_3447 		0.497 1.000
BARX2
M04915_2.00 		Homo sapiens
NTAAYKRTTWWN
NWWAAYMRTTAN		 SELEX
Yin et al.(2017)
BARX2_FL_HT-SELEX 		0.497 1.000
BARX2
M04916_2.00 		Homo sapiens
NTAAYKRTTWWN
NWWAAYMRTTAN		 SELEX
Yin et al.(2017)
BARX2_FL_Methyl-HT-SELEX 		0.497 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000008226 Homeodomain 1 45

Links

Other Homeodomain family TFs
Other Astyanax mexicanus TFs

746 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00147p00053080 Amborella trichopoda AMTR_s00147p00053080 N
BGIOSGA000005 Oryza indica BGIOSGA000005 I
Bra020650 Brassica rapa Bra020650 I
BRADI2G62660 Brachypodium distachyon BRADI2G62660 I
CME102C Cyanidioschyzon merolae CME102C N
F775_43556 Aegilops tauschii F775_43556 I
Gorai.013G206400 Gossypium raimondii Gorai.013G206400 N
GRMZM2G138967 Zea mays GRMZM2G138967 N
GSMUA_Achr11G17770_001 Musa acuminata GSMUA_Achr11G17770_001 I
LPERR04G11580 Leersia perrieri LPERR04G11580 I
MLOC_54886 Hordeum vulgare MLOC_54886 I
OB01G55040 Oryza brachyantha OB01G55040 I
OBART01G45830 Oryza barthii OBART01G45830 I
OGLUM01G50190 Oryza glumaepatula OGLUM01G50190 I
OLONG_011157 Oryza longistaminata OLONG_011157 I
ONIVA01G52080 Oryza nivara ONIVA01G52080 I
ORGLA01G0395900 Oryza glaberrima ORGLA01G0395900 I
ORUFI01G49320 Oryza rufipogon ORUFI01G49320 I
OS01G0976800 Oryza sativa OS01G0976800 I
Pavir.Eb04066 Panicum virgatum Pavir.Eb04066 I
Pm003128 Prunus mume Pm003128 I
PRUPE_ppa015310mg Prunus persica PRUPE_ppa015310mg I
Sb03g047520 Sorghum bicolor Sb03g047520 I
Si002983m.g Setaria italica Si002983m.g I
TRAES3BF026000060CFD_g Triticum aestivum TRAES3BF026000060CFD_g I
Traes_3AL_6DE434492 Triticum aestivum Traes_3AL_6DE434492 I
Traes_5BL_F258582BB Triticum aestivum Traes_5BL_F258582BB I
TRIUR3_03165 Triticum urartu TRIUR3_03165 I
VIT_14s0060g01520 Vitis vinifera VIT_14s0060g01520 I