CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS01G0976800
(
Oryza sativa
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
OS01G0976800
T194560_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GATA16
M06897_2.00
Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT
Dap-seq
OMalley et al.(2016)
GATA16_col_a
0.811
0.833
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS01T0976800-01
GATA
24
59
CADCHTTKTPLWRGGPGGPKSLCNACGIRYRKRRRA
Links
Other
GATA
family TFs
Other
Oryza sativa
TFs
107 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA000005
Oryza indica
BGIOSGA000005
I
0.867
LPERR04G11580
Leersia perrieri
LPERR04G11580
I
0.867
OB01G55040
Oryza brachyantha
OB01G55040
I
0.867
OBART01G45830
Oryza barthii
OBART01G45830
I
0.867
OGLUM01G50190
Oryza glumaepatula
OGLUM01G50190
I
0.867
OLONG_011157
Oryza longistaminata
OLONG_011157
I
0.867
ONIVA01G52080
Oryza nivara
ONIVA01G52080
I
0.867
ORGLA01G0395900
Oryza glaberrima
ORGLA01G0395900
I
0.867
ORUFI01G49320
Oryza rufipogon
ORUFI01G49320
I
0.867
BRADI2G62660
Brachypodium distachyon
BRADI2G62660
I
0.856
MLOC_54886
Hordeum vulgare
MLOC_54886
I
0.856
Sb03g047520
Sorghum bicolor
Sb03g047520
I
0.856
Si002983m.g
Setaria italica
Si002983m.g
I
0.856
Traes_3AL_6DE434492
Triticum aestivum
Traes_3AL_6DE434492
I
0.856
TRAES3BF026000060CFD_g
Triticum aestivum
TRAES3BF026000060CFD_g
I
0.856
TRIUR3_03165
Triticum urartu
TRIUR3_03165
I
0.856
VIT_14s0060g01520
Vitis vinifera
VIT_14s0060g01520
I
0.856
Pavir.Eb04066
Panicum virgatum
Pavir.Eb04066
I
0.856
AMTR_s00147p00053080
Amborella trichopoda
AMTR_s00147p00053080
N
0.842
Gorai.013G206400
Gossypium raimondii
Gorai.013G206400
N
0.842
PRUPE_ppa015310mg
Prunus persica
PRUPE_ppa015310mg
I
0.841
Pm003128
Prunus mume
Pm003128
I
0.841
Bra020650
Brassica rapa
Bra020650
I
0.838
BGIOSGA013867
Oryza indica
BGIOSGA013867
I
0.829
BGIOSGA013869
Oryza indica
BGIOSGA013869
I
0.829
BRADI1G03020
Brachypodium distachyon
BRADI1G03020
I
0.829
LPERR03G33900
Leersia perrieri
LPERR03G33900
I
0.829
OBART03G39750
Oryza barthii
OBART03G39750
I
0.829
OGLUM03G39650
Oryza glumaepatula
OGLUM03G39650
I
0.829
OLONG_023900
Oryza longistaminata
OLONG_023900
I
0.829
OMERI03G36600
Oryza meridionalis
OMERI03G36600
I
0.829
ONIVA03G41600
Oryza nivara
ONIVA03G41600
I
0.829
OPUNC03G36900
Oryza punctata
OPUNC03G36900
I
0.829
OPUNC03G36910
Oryza punctata
OPUNC03G36910
I
0.829
ORUFI03G41540
Oryza rufipogon
ORUFI03G41540
I
0.829
OS03G0831200
Oryza sativa
OS03G0831200
I
0.829
POPTR_0005s02040
Populus trichocarpa
POPTR_0005s02040
I
0.829
TCM_026732
Theobroma cacao
TCM_026732
I
0.829
cassava15577.m1
Manihot esculenta
cassava15577.m1
I
0.829
cassava15588.m1
Manihot esculenta
cassava15588.m1
I
0.829
evm.TU.supercontig_151.51
Carica papaya
evm.TU.supercontig_151.51
I
0.829
evm.TU.supercontig_48.133
Carica papaya
evm.TU.supercontig_48.133
I
0.829
Gorai.013G127900
Gossypium raimondii
Gorai.013G127900
I
0.829
SapurV1A.0107s0060
Salix purpurea
SapurV1A.0107s0060
I
0.829
SapurV1A.0186s0560
Salix purpurea
SapurV1A.0186s0560
I
0.829
Cla005266
Citrullus lanatus
Cla005266
N
0.828
Ciclev10022856m.g
Citrus clementina
Ciclev10022856m.g
I
0.828
Gorai.007G125000
Gossypium raimondii
Gorai.007G125000
I
0.828
orange1.1g033001m.g
Citrus sinensis
orange1.1g033001m.g
I
0.828
GRMZM2G138967
Zea mays
GRMZM2G138967
N
0.825
Pavir.Ab00108
Panicum virgatum
Pavir.Ab00108
N
0.825
Lus10020684.g
Linum usitatissimum
Lus10020684.g
N
0.823
Lus10029863.g
Linum usitatissimum
Lus10029863.g
N
0.823
PGSC0003DMG400004624
Solanum tuberosum
PGSC0003DMG400004624
I
0.816
Solyc12g099370.1
Solanum lycopersicum
Solyc12g099370.1
I
0.816
VIT_05s0077g01450
Vitis vinifera
VIT_05s0077g01450
I
0.816
Cla009422
Citrullus lanatus
Cla009422
I
0.816
Cucsa.069460
Cucumis sativus
Cucsa.069460
I
0.816
Ciclev10006161m.g
Citrus clementina
Ciclev10006161m.g
I
0.816
Eucgr.H04023
Eucalyptus grandis
Eucgr.H04023
I
0.816
orange1.1g032112m.g
Citrus sinensis
orange1.1g032112m.g
I
0.816
PK18820.1
Cannabis sativa
PK18820.1
I
0.816
GSMUA_Achr8G33850_001
Musa acuminata
GSMUA_Achr8G33850_001
N
0.815
mgf022078m
Mimulus guttatus
mgf022078m
I
0.815
GLYMA07G37190
Glycine max
GLYMA07G37190
I
0.814
GLYMA17G03410
Glycine max
GLYMA17G03410
I
0.814
GSMUA_Achr1G14780_001
Musa acuminata
GSMUA_Achr1G14780_001
N
0.814
TCM_004753
Theobroma cacao
TCM_004753
I
0.814
29889.m003248
Ricinus communis
29889.m003248
I
0.814
30128.m008883
Ricinus communis
30128.m008883
N
0.814
cassava37139.valid.m1
Manihot esculenta
cassava37139.valid.m1
I
0.814
mgf011737m
Mimulus guttatus
mgf011737m
N
0.814
Ciclev10003698m.g
Citrus clementina
Ciclev10003698m.g
I
0.814
Gorai.008G142200
Gossypium raimondii
Gorai.008G142200
I
0.814
orange1.1g030971m.g
Citrus sinensis
orange1.1g030971m.g
I
0.814
PK21934.1
Cannabis sativa
PK21934.1
I
0.814
GATA16
Arabidopsis thaliana
AT5G49300
D
0.811
Bo00847s050
Brassica oleracea
Bo00847s050
I
0.811
PRUPE_ppa013171mg
Prunus persica
PRUPE_ppa013171mg
I
0.811
GATA16
Arabidopsis lyrata
scaffold_801309.1
I
0.811
TCM_021303
Theobroma cacao
TCM_021303
I
0.811
Cla022104
Citrullus lanatus
Cla022104
I
0.811
Pm008287
Prunus mume
Pm008287
I
0.811
cassava43030.valid.m1
Manihot esculenta
cassava43030.valid.m1
I
0.811
Cucsa.252730
Cucumis sativus
Cucsa.252730
I
0.811
mgf003937m
Mimulus guttatus
mgf003937m
I
0.811
Bostr.15774s0060
Boechera stricta
Bostr.15774s0060
I
0.811
Carubv10027332m.g
Capsella rubella
Carubv10027332m.g
I
0.811
Eucgr.A00193
Eucalyptus grandis
Eucgr.A00193
I
0.811
evm.TU.supercontig_9.102
Carica papaya
evm.TU.supercontig_9.102
I
0.811
gene05175-v1.0-hybrid
Fragaria vesca
gene05175-v1.0-hybrid
I
0.811
Gorai.005G065300
Gossypium raimondii
Gorai.005G065300
I
0.811
Lus10016849.g
Linum usitatissimum
Lus10016849.g
I
0.811
Lus10037721.g
Linum usitatissimum
Lus10037721.g
I
0.811
Thhalv10005103m.g
Eutrema salsugineum
Thhalv10005103m.g
I
0.811
MTR_4g121110
Medicago truncatula
MTR_4g121110
I
0.810
POPTR_0008s22950
Populus trichocarpa
POPTR_0008s22950
I
0.810
POPTR_0010s00360
Populus trichocarpa
POPTR_0010s00360
I
0.810
Ca_02992
Cicer arietinum
Ca_02992
I
0.810
SapurV1A.0739s0060
Salix purpurea
SapurV1A.0739s0060
I
0.810
SapurV1A.2413s0010
Salix purpurea
SapurV1A.2413s0010
I
0.810
LjSGA_011217.1
Lotus japonicus
LjSGA_011217.1
I
0.810
AMTR_s00025p00250380
Amborella trichopoda
AMTR_s00025p00250380
N
0.809
GSMUA_Achr7G03800_001
Musa acuminata
GSMUA_Achr7G03800_001
N
0.809
Lus10031464.g
Linum usitatissimum
Lus10031464.g
I
0.809
MDP0000309902
Malus domestica
MDP0000309902
I
0.809
CME102C
Cyanidioschyzon merolae
CME102C
N
0.805