Lus10029863.g (Linum usitatissimum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Lus10029863.g T196643_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10029863 GATA 25 65

Links

Other GATA family TFs
Other Linum usitatissimum TFs

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10020684.g Linum usitatissimum Lus10020684.g N 0.853
PRUPE_ppa015310mg Prunus persica PRUPE_ppa015310mg I 0.847
Pm003128 Prunus mume Pm003128 I 0.847
Bra020650 Brassica rapa Bra020650 I 0.839
mgf011737m Mimulus guttatus mgf011737m N 0.837
AMTR_s00147p00053080 Amborella trichopoda AMTR_s00147p00053080 N 0.834
VIT_14s0060g01520 Vitis vinifera VIT_14s0060g01520 I 0.834
BGIOSGA000005 Oryza indica BGIOSGA000005 I 0.823
BRADI2G62660 Brachypodium distachyon BRADI2G62660 I 0.823
LPERR04G11580 Leersia perrieri LPERR04G11580 I 0.823
MLOC_54886 Hordeum vulgare MLOC_54886 I 0.823
OB01G55040 Oryza brachyantha OB01G55040 I 0.823
OBART01G45830 Oryza barthii OBART01G45830 I 0.823
OGLUM01G50190 Oryza glumaepatula OGLUM01G50190 I 0.823
OLONG_011157 Oryza longistaminata OLONG_011157 I 0.823
ONIVA01G52080 Oryza nivara ONIVA01G52080 I 0.823
ORGLA01G0395900 Oryza glaberrima ORGLA01G0395900 I 0.823
ORUFI01G49320 Oryza rufipogon ORUFI01G49320 I 0.823
OS01G0976800 Oryza sativa OS01G0976800 I 0.823
Sb03g047520 Sorghum bicolor Sb03g047520 I 0.823
Si002983m.g Setaria italica Si002983m.g I 0.823
Traes_3AL_6DE434492 Triticum aestivum Traes_3AL_6DE434492 I 0.823
TRAES3BF026000060CFD_g Triticum aestivum TRAES3BF026000060CFD_g I 0.823
TRIUR3_03165 Triticum urartu TRIUR3_03165 I 0.823
Cla005266 Citrullus lanatus Cla005266 N 0.823
Pavir.Eb04066 Panicum virgatum Pavir.Eb04066 I 0.823
PK21934.1 Cannabis sativa PK21934.1 I 0.821
TCM_004753 Theobroma cacao TCM_004753 I 0.820
GLYMA17G34670 Glycine max GLYMA17G34670 N 0.816
MTR_1g016170 Medicago truncatula MTR_1g016170 N 0.816
PGSC0003DMG400002337 Solanum tuberosum PGSC0003DMG400002337 I 0.816
Traes_6BS_4EA352A7A Triticum aestivum Traes_6BS_4EA352A7A N 0.816
MDP0000309902 Malus domestica MDP0000309902 I 0.816
MDP0000739900 Malus domestica MDP0000739900 N 0.816
chr5.CM0019.380.nc Lotus japonicus chr5.CM0019.380.nc N 0.816
Bo00847s050 Brassica oleracea Bo00847s050 I 0.812
CME102C Cyanidioschyzon merolae CME102C N 0.812
PRUPE_ppa013171mg Prunus persica PRUPE_ppa013171mg I 0.812
GATA16 Arabidopsis lyrata scaffold_801309.1 I 0.812
TCM_021303 Theobroma cacao TCM_021303 I 0.812
Cla022104 Citrullus lanatus Cla022104 I 0.812
Pm008287 Prunus mume Pm008287 I 0.812
cassava43030.valid.m1 Manihot esculenta cassava43030.valid.m1 I 0.812
Cucsa.252730 Cucumis sativus Cucsa.252730 I 0.812
mgf003937m Mimulus guttatus mgf003937m I 0.812
Bostr.15774s0060 Boechera stricta Bostr.15774s0060 I 0.812
Carubv10027332m.g Capsella rubella Carubv10027332m.g I 0.812
Eucgr.A00193 Eucalyptus grandis Eucgr.A00193 I 0.812
evm.TU.supercontig_9.102 Carica papaya evm.TU.supercontig_9.102 I 0.812
gene05175-v1.0-hybrid Fragaria vesca gene05175-v1.0-hybrid I 0.812
Gorai.005G065300 Gossypium raimondii Gorai.005G065300 I 0.812
Lus10016849.g Linum usitatissimum Lus10016849.g I 0.812
Lus10037721.g Linum usitatissimum Lus10037721.g I 0.812
Thhalv10005103m.g Eutrema salsugineum Thhalv10005103m.g I 0.812
AMTR_s00064p00107710 Amborella trichopoda AMTR_s00064p00107710 N 0.811
GATA22 Arabidopsis thaliana AT4G26150 N 0.811
GATA21 Arabidopsis thaliana AT5G56860 N 0.811
BGIOSGA006859 Oryza indica BGIOSGA006859 N 0.811
BGIOSGA023117 Oryza indica BGIOSGA023117 N 0.811
BGIOSGA023119 Oryza indica BGIOSGA023119 N 0.811
Bo1g042950 Brassica oleracea Bo1g042950 N 0.811
Bo2g033970 Brassica oleracea Bo2g033970 N 0.811
Bo7g110740 Brassica oleracea Bo7g110740 N 0.811
Bo9g127360 Brassica oleracea Bo9g127360 N 0.811
Bra002788 Brassica rapa Bra002788 N 0.811
Bra019118 Brassica rapa Bra019118 N 0.811
Bra026461 Brassica rapa Bra026461 N 0.811
Bra035633 Brassica rapa Bra035633 N 0.811
BRADI1G37480 Brachypodium distachyon BRADI1G37480 N 0.811
BRADI3G08240 Brachypodium distachyon BRADI3G08240 N 0.811
CGA1 Arabidopsis lyrata fgenesh2_kg.7__1630__AT4G26150.1 N 0.811
GNC Arabidopsis lyrata fgenesh2_kg.8__1592__AT5G56860.1 N 0.811
GLYMA04G05431 Glycine max GLYMA04G05431 N 0.811
GLYMA13G00200 Glycine max GLYMA13G00200 N 0.811
GLYMA15G18380 Glycine max GLYMA15G18380 N 0.811
GLYMA17G06290 Glycine max GLYMA17G06290 N 0.811
GRMZM2G031983 Zea mays GRMZM2G031983 N 0.811
GRMZM2G039586 Zea mays GRMZM2G039586 N 0.811
GSMUA_Achr10G27510_001 Musa acuminata GSMUA_Achr10G27510_001 N 0.811
GSMUA_Achr4G30820_001 Musa acuminata GSMUA_Achr4G30820_001 N 0.811
GSMUA_Achr8G24880_001 Musa acuminata GSMUA_Achr8G24880_001 N 0.811
LPERR02G07780 Leersia perrieri LPERR02G07780 N 0.811
LPERR06G15680 Leersia perrieri LPERR06G15680 N 0.811
MLOC_10364 Hordeum vulgare MLOC_10364 N 0.811
MLOC_70809 Hordeum vulgare MLOC_70809 N 0.811
MTR_2g038720 Medicago truncatula MTR_2g038720 N 0.811
MTR_4g121110 Medicago truncatula MTR_4g121110 I 0.811
MTR_4g126350 Medicago truncatula MTR_4g126350 N 0.811
OB02G18010 Oryza brachyantha OB02G18010 N 0.811
OB06G26630 Oryza brachyantha OB06G26630 N 0.811
OBART02G08990 Oryza barthii OBART02G08990 N 0.811
OBART06G19060 Oryza barthii OBART06G19060 N 0.811
OGLUM02G09200 Oryza glumaepatula OGLUM02G09200 N 0.811
OGLUM06G20240 Oryza glumaepatula OGLUM06G20240 N 0.811
OMERI02G10250 Oryza meridionalis OMERI02G10250 N 0.811
ONIVA06G22870 Oryza nivara ONIVA06G22870 N 0.811
ONIVA11G03260 Oryza nivara ONIVA11G03260 N 0.811
OPUNC02G08040 Oryza punctata OPUNC02G08040 N 0.811
OPUNC06G17260 Oryza punctata OPUNC06G17260 N 0.811
ORGLA06G0158200 Oryza glaberrima ORGLA06G0158200 N 0.811
ORUFI02G09020 Oryza rufipogon ORUFI02G09020 N 0.811
ORUFI06G20160 Oryza rufipogon ORUFI06G20160 N 0.811
OS02G0220400 Oryza sativa OS02G0220400 N 0.811
OS06G0571800 Oryza sativa OS06G0571800 N 0.811
PGSC0003DMG400000280 Solanum tuberosum PGSC0003DMG400000280 N 0.811
PGSC0003DMG400004493 Solanum tuberosum PGSC0003DMG400004493 N 0.811
POPTR_0006s24560 Populus trichocarpa POPTR_0006s24560 N 0.811
POPTR_0008s22950 Populus trichocarpa POPTR_0008s22950 I 0.811
POPTR_0010s00360 Populus trichocarpa POPTR_0010s00360 I 0.811
POPTR_0018s05160 Populus trichocarpa POPTR_0018s05160 N 0.811
PRUPE_ppa018120mg Prunus persica PRUPE_ppa018120mg N 0.811
PRUPE_ppa024374mg Prunus persica PRUPE_ppa024374mg N 0.811
Sb04g007750 Sorghum bicolor Sb04g007750 N 0.811
Sb10g022580 Sorghum bicolor Sb10g022580 N 0.811
Si006733m.g Setaria italica Si006733m.g N 0.811
Si019058m.g Setaria italica Si019058m.g N 0.811
Solyc07g038160.2 Solanum lycopersicum Solyc07g038160.2 N 0.811
Solyc12g008830.1 Solanum lycopersicum Solyc12g008830.1 N 0.811
TCM_037285 Theobroma cacao TCM_037285 N 0.811
TCM_037666 Theobroma cacao TCM_037666 N 0.811
Traes_6AS_1BF0823061 Triticum aestivum Traes_6AS_1BF0823061 N 0.811
Traes_6AS_1BF082306 Triticum aestivum Traes_6AS_1BF082306 N 0.811
Traes_6DS_77038429A Triticum aestivum Traes_6DS_77038429A N 0.811
Traes_7BL_86BB5C61E Triticum aestivum Traes_7BL_86BB5C61E N 0.811
Traes_7DL_BFADB408C Triticum aestivum Traes_7DL_BFADB408C N 0.811
VIT_04s0008g01290 Vitis vinifera VIT_04s0008g01290 N 0.811
VIT_11s0016g02210 Vitis vinifera VIT_11s0016g02210 N 0.811
Ca_02992 Cicer arietinum Ca_02992 I 0.811
Cla021191 Citrullus lanatus Cla021191 N 0.811
Pm005502 Prunus mume Pm005502 N 0.811
Pm027164 Prunus mume Pm027164 N 0.811
29794.m003323 Ricinus communis 29794.m003323 N 0.811
29912.m005322 Ricinus communis 29912.m005322 N 0.811
cassava32152.m1 Manihot esculenta cassava32152.m1 N 0.811
cassava33236.m1 Manihot esculenta cassava33236.m1 N 0.811
cassava43851.valid.m1 Manihot esculenta cassava43851.valid.m1 N 0.811
Cucsa.353330 Cucumis sativus Cucsa.353330 N 0.811
Cucsa.397360 Cucumis sativus Cucsa.397360 N 0.811
mgf008387m Mimulus guttatus mgf008387m N 0.811
mgf025842m Mimulus guttatus mgf025842m N 0.811
Aquca_020_00467 Aquilegia coerulea Aquca_020_00467 N 0.811
Bostr.26833s0575 Boechera stricta Bostr.26833s0575 N 0.811
Bostr.7867s0434 Boechera stricta Bostr.7867s0434 N 0.811
Cagra.3467s0056 Capsella grandiflora Cagra.3467s0056 N 0.811
Cagra.4138s0005 Capsella grandiflora Cagra.4138s0005 N 0.811
Carubv10005113m.g Capsella rubella Carubv10005113m.g N 0.811
Carubv10026556m.g Capsella rubella Carubv10026556m.g N 0.811
Ciclev10008943m.g Citrus clementina Ciclev10008943m.g N 0.811
Ciclev10008968m.g Citrus clementina Ciclev10008968m.g N 0.811
Ciclev10009004m.g Citrus clementina Ciclev10009004m.g N 0.811
Eucgr.C03048 Eucalyptus grandis Eucgr.C03048 N 0.811
Eucgr.C03895 Eucalyptus grandis Eucgr.C03895 N 0.811
evm.TU.supercontig_93.28 Carica papaya evm.TU.supercontig_93.28 N 0.811
gene02686-v1.0-hybrid Fragaria vesca gene02686-v1.0-hybrid N 0.811
gene12624-v1.0-hybrid Fragaria vesca gene12624-v1.0-hybrid N 0.811
Gorai.009G031400 Gossypium raimondii Gorai.009G031400 N 0.811
Gorai.009G045000 Gossypium raimondii Gorai.009G045000 N 0.811
Gorai.010G082800 Gossypium raimondii Gorai.010G082800 N 0.811
Gorai.010G101100 Gossypium raimondii Gorai.010G101100 N 0.811
MDP0000131803 Malus domestica MDP0000131803 N 0.811
MDP0000190038 Malus domestica MDP0000190038 N 0.811
MDP0000237740 Malus domestica MDP0000237740 N 0.811
orange1.1g020987m.g Citrus sinensis orange1.1g020987m.g N 0.811
orange1.1g021329m.g Citrus sinensis orange1.1g021329m.g N 0.811
orange1.1g021859m.g Citrus sinensis orange1.1g021859m.g N 0.811
Pavir.Aa02907 Panicum virgatum Pavir.Aa02907 N 0.811
Pavir.Ab00790 Panicum virgatum Pavir.Ab00790 N 0.811
Pavir.Da00760 Panicum virgatum Pavir.Da00760 N 0.811
Pavir.Db01250 Panicum virgatum Pavir.Db01250 N 0.811
SapurV1A.0086s0290 Salix purpurea SapurV1A.0086s0290 N 0.811
SapurV1A.0739s0060 Salix purpurea SapurV1A.0739s0060 I 0.811
SapurV1A.2413s0010 Salix purpurea SapurV1A.2413s0010 I 0.811
Thhalv10013793m.g Eutrema salsugineum Thhalv10013793m.g N 0.811
Thhalv10025461m.g Eutrema salsugineum Thhalv10025461m.g N 0.811
PK07593.1 Cannabis sativa PK07593.1 N 0.811
chr4.CM0244.740.nd Lotus japonicus chr4.CM0244.740.nd N 0.811
LjSGA_011217.1 Lotus japonicus LjSGA_011217.1 I 0.811
Gorai.013G206400 Gossypium raimondii Gorai.013G206400 N 0.809
PGSC0003DMG400004624 Solanum tuberosum PGSC0003DMG400004624 I 0.808
POPTR_0005s02040 Populus trichocarpa POPTR_0005s02040 I 0.808
Solyc12g099370.1 Solanum lycopersicum Solyc12g099370.1 I 0.808
TCM_026732 Theobroma cacao TCM_026732 I 0.808
VIT_05s0077g01450 Vitis vinifera VIT_05s0077g01450 I 0.808
Cla009422 Citrullus lanatus Cla009422 I 0.808
cassava15577.m1 Manihot esculenta cassava15577.m1 I 0.808
cassava15588.m1 Manihot esculenta cassava15588.m1 I 0.808
Cucsa.069460 Cucumis sativus Cucsa.069460 I 0.808
Ciclev10006161m.g Citrus clementina Ciclev10006161m.g I 0.808
Eucgr.H04023 Eucalyptus grandis Eucgr.H04023 I 0.808
evm.TU.supercontig_151.51 Carica papaya evm.TU.supercontig_151.51 I 0.808
evm.TU.supercontig_48.133 Carica papaya evm.TU.supercontig_48.133 I 0.808
Gorai.013G127900 Gossypium raimondii Gorai.013G127900 I 0.808
orange1.1g032112m.g Citrus sinensis orange1.1g032112m.g I 0.808
SapurV1A.0107s0060 Salix purpurea SapurV1A.0107s0060 I 0.808
SapurV1A.0186s0560 Salix purpurea SapurV1A.0186s0560 I 0.808
PK18820.1 Cannabis sativa PK18820.1 I 0.808
GLYMA07G37190 Glycine max GLYMA07G37190 I 0.807
GLYMA17G03410 Glycine max GLYMA17G03410 I 0.807
29889.m003248 Ricinus communis 29889.m003248 I 0.807
30128.m008883 Ricinus communis 30128.m008883 N 0.807
cassava37139.valid.m1 Manihot esculenta cassava37139.valid.m1 I 0.807
Aquca_003_00608 Aquilegia coerulea Aquca_003_00608 N 0.807
Ciclev10003698m.g Citrus clementina Ciclev10003698m.g I 0.807
Ciclev10022856m.g Citrus clementina Ciclev10022856m.g I 0.807
Gorai.007G125000 Gossypium raimondii Gorai.007G125000 I 0.807
Gorai.008G142200 Gossypium raimondii Gorai.008G142200 I 0.807
orange1.1g030971m.g Citrus sinensis orange1.1g030971m.g I 0.807
orange1.1g033001m.g Citrus sinensis orange1.1g033001m.g I 0.807