Pavir.Aa02907 (Panicum virgatum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Pavir.Aa02907 T196723_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Aa02907.1.p GATA 183 218

Links

Other GATA family TFs
Other Panicum virgatum TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA006859 Oryza indica BGIOSGA006859 N 0.867
BGIOSGA023117 Oryza indica BGIOSGA023117 N 0.867
BGIOSGA023119 Oryza indica BGIOSGA023119 N 0.867
BRADI1G37480 Brachypodium distachyon BRADI1G37480 N 0.867
BRADI3G08240 Brachypodium distachyon BRADI3G08240 N 0.867
GRMZM2G039586 Zea mays GRMZM2G039586 N 0.867
LPERR02G07780 Leersia perrieri LPERR02G07780 N 0.867
MLOC_10364 Hordeum vulgare MLOC_10364 N 0.867
OB02G18010 Oryza brachyantha OB02G18010 N 0.867
OB06G26630 Oryza brachyantha OB06G26630 N 0.867
OBART02G08990 Oryza barthii OBART02G08990 N 0.867
OBART06G19060 Oryza barthii OBART06G19060 N 0.867
OGLUM02G09200 Oryza glumaepatula OGLUM02G09200 N 0.867
OGLUM06G20240 Oryza glumaepatula OGLUM06G20240 N 0.867
OMERI02G10250 Oryza meridionalis OMERI02G10250 N 0.867
ONIVA06G22870 Oryza nivara ONIVA06G22870 N 0.867
ONIVA11G03260 Oryza nivara ONIVA11G03260 N 0.867
OPUNC02G08040 Oryza punctata OPUNC02G08040 N 0.867
OPUNC06G17260 Oryza punctata OPUNC06G17260 N 0.867
ORGLA06G0158200 Oryza glaberrima ORGLA06G0158200 N 0.867
ORUFI02G09020 Oryza rufipogon ORUFI02G09020 N 0.867
ORUFI06G20160 Oryza rufipogon ORUFI06G20160 N 0.867
OS02G0220400 Oryza sativa OS02G0220400 N 0.867
OS06G0571800 Oryza sativa OS06G0571800 N 0.867
Sb04g007750 Sorghum bicolor Sb04g007750 N 0.867
Sb10g022580 Sorghum bicolor Sb10g022580 N 0.867
Si006733m.g Setaria italica Si006733m.g N 0.867
Si019058m.g Setaria italica Si019058m.g N 0.867
Traes_6AS_1BF0823061 Triticum aestivum Traes_6AS_1BF0823061 N 0.867
Traes_6AS_1BF082306 Triticum aestivum Traes_6AS_1BF082306 N 0.867
Traes_6DS_77038429A Triticum aestivum Traes_6DS_77038429A N 0.867
Traes_7BL_86BB5C61E Triticum aestivum Traes_7BL_86BB5C61E N 0.867
Traes_7DL_BFADB408C Triticum aestivum Traes_7DL_BFADB408C N 0.867
Pavir.Ab00790 Panicum virgatum Pavir.Ab00790 N 0.867
Pavir.Da00760 Panicum virgatum Pavir.Da00760 N 0.867
Pavir.Db01250 Panicum virgatum Pavir.Db01250 N 0.867
Traes_6BS_4EA352A7A Triticum aestivum Traes_6BS_4EA352A7A N 0.862
AMTR_s00064p00107710 Amborella trichopoda AMTR_s00064p00107710 N 0.856
GATA22 Arabidopsis thaliana AT4G26150 N 0.856
GATA21 Arabidopsis thaliana AT5G56860 N 0.856
Bo1g042950 Brassica oleracea Bo1g042950 N 0.856
Bo2g033970 Brassica oleracea Bo2g033970 N 0.856
Bo7g110740 Brassica oleracea Bo7g110740 N 0.856
Bo9g127360 Brassica oleracea Bo9g127360 N 0.856
Bra002788 Brassica rapa Bra002788 N 0.856
Bra019118 Brassica rapa Bra019118 N 0.856
Bra026461 Brassica rapa Bra026461 N 0.856
Bra035633 Brassica rapa Bra035633 N 0.856
CGA1 Arabidopsis lyrata fgenesh2_kg.7__1630__AT4G26150.1 N 0.856
GNC Arabidopsis lyrata fgenesh2_kg.8__1592__AT5G56860.1 N 0.856
GLYMA04G05431 Glycine max GLYMA04G05431 N 0.856
GLYMA13G00200 Glycine max GLYMA13G00200 N 0.856
GLYMA17G06290 Glycine max GLYMA17G06290 N 0.856
GRMZM2G031983 Zea mays GRMZM2G031983 N 0.856
GSMUA_Achr10G27510_001 Musa acuminata GSMUA_Achr10G27510_001 N 0.856
GSMUA_Achr4G30820_001 Musa acuminata GSMUA_Achr4G30820_001 N 0.856
MTR_2g038720 Medicago truncatula MTR_2g038720 N 0.856
MTR_4g126350 Medicago truncatula MTR_4g126350 N 0.856
PGSC0003DMG400000280 Solanum tuberosum PGSC0003DMG400000280 N 0.856
PGSC0003DMG400004493 Solanum tuberosum PGSC0003DMG400004493 N 0.856
POPTR_0006s24560 Populus trichocarpa POPTR_0006s24560 N 0.856
POPTR_0018s05160 Populus trichocarpa POPTR_0018s05160 N 0.856
PRUPE_ppa024374mg Prunus persica PRUPE_ppa024374mg N 0.856
Solyc07g038160.2 Solanum lycopersicum Solyc07g038160.2 N 0.856
Solyc12g008830.1 Solanum lycopersicum Solyc12g008830.1 N 0.856
TCM_037285 Theobroma cacao TCM_037285 N 0.856
TCM_037666 Theobroma cacao TCM_037666 N 0.856
VIT_04s0008g01290 Vitis vinifera VIT_04s0008g01290 N 0.856
VIT_11s0016g02210 Vitis vinifera VIT_11s0016g02210 N 0.856
Cla021191 Citrullus lanatus Cla021191 N 0.856
Pm027164 Prunus mume Pm027164 N 0.856
29794.m003323 Ricinus communis 29794.m003323 N 0.856
29912.m005322 Ricinus communis 29912.m005322 N 0.856
cassava32152.m1 Manihot esculenta cassava32152.m1 N 0.856
cassava33236.m1 Manihot esculenta cassava33236.m1 N 0.856
cassava43851.valid.m1 Manihot esculenta cassava43851.valid.m1 N 0.856
Cucsa.353330 Cucumis sativus Cucsa.353330 N 0.856
Cucsa.397360 Cucumis sativus Cucsa.397360 N 0.856
mgf008387m Mimulus guttatus mgf008387m N 0.856
mgf025842m Mimulus guttatus mgf025842m N 0.856
Aquca_020_00467 Aquilegia coerulea Aquca_020_00467 N 0.856
Bostr.26833s0575 Boechera stricta Bostr.26833s0575 N 0.856
Bostr.7867s0434 Boechera stricta Bostr.7867s0434 N 0.856
Cagra.3467s0056 Capsella grandiflora Cagra.3467s0056 N 0.856
Cagra.4138s0005 Capsella grandiflora Cagra.4138s0005 N 0.856
Carubv10005113m.g Capsella rubella Carubv10005113m.g N 0.856
Carubv10026556m.g Capsella rubella Carubv10026556m.g N 0.856
Ciclev10008943m.g Citrus clementina Ciclev10008943m.g N 0.856
Ciclev10008968m.g Citrus clementina Ciclev10008968m.g N 0.856
Ciclev10009004m.g Citrus clementina Ciclev10009004m.g N 0.856
Eucgr.C03048 Eucalyptus grandis Eucgr.C03048 N 0.856
Eucgr.C03895 Eucalyptus grandis Eucgr.C03895 N 0.856
evm.TU.supercontig_93.28 Carica papaya evm.TU.supercontig_93.28 N 0.856
gene12624-v1.0-hybrid Fragaria vesca gene12624-v1.0-hybrid N 0.856
Gorai.009G031400 Gossypium raimondii Gorai.009G031400 N 0.856
Gorai.009G045000 Gossypium raimondii Gorai.009G045000 N 0.856
Gorai.010G082800 Gossypium raimondii Gorai.010G082800 N 0.856
Gorai.010G101100 Gossypium raimondii Gorai.010G101100 N 0.856
MDP0000131803 Malus domestica MDP0000131803 N 0.856
MDP0000190038 Malus domestica MDP0000190038 N 0.856
orange1.1g020987m.g Citrus sinensis orange1.1g020987m.g N 0.856
orange1.1g021329m.g Citrus sinensis orange1.1g021329m.g N 0.856
orange1.1g021859m.g Citrus sinensis orange1.1g021859m.g N 0.856
SapurV1A.0086s0290 Salix purpurea SapurV1A.0086s0290 N 0.856
Thhalv10013793m.g Eutrema salsugineum Thhalv10013793m.g N 0.856
Thhalv10025461m.g Eutrema salsugineum Thhalv10025461m.g N 0.856
PK07593.1 Cannabis sativa PK07593.1 N 0.856
chr4.CM0244.740.nd Lotus japonicus chr4.CM0244.740.nd N 0.856
GLYMA17G34670 Glycine max GLYMA17G34670 N 0.851
MTR_1g016170 Medicago truncatula MTR_1g016170 N 0.851
PRUPE_ppa018120mg Prunus persica PRUPE_ppa018120mg N 0.851
Pm005502 Prunus mume Pm005502 N 0.851
gene02686-v1.0-hybrid Fragaria vesca gene02686-v1.0-hybrid N 0.851
MDP0000237740 Malus domestica MDP0000237740 N 0.851
MDP0000739900 Malus domestica MDP0000739900 N 0.851
chr5.CM0019.380.nc Lotus japonicus chr5.CM0019.380.nc N 0.851
GSMUA_Achr8G24880_001 Musa acuminata GSMUA_Achr8G24880_001 N 0.842
LPERR06G15680 Leersia perrieri LPERR06G15680 N 0.840
MLOC_70809 Hordeum vulgare MLOC_70809 N 0.840
GLYMA14G10830 Glycine max GLYMA14G10830 N 0.837
GLYMA15G18380 Glycine max GLYMA15G18380 N 0.829
Bo3g019610 Brassica oleracea Bo3g019610 I 0.825
Bra006851 Brassica rapa Bra006851 I 0.825
GSMUA_Achr7G09030_001 Musa acuminata GSMUA_Achr7G09030_001 I 0.825
PK21934.1 Cannabis sativa PK21934.1 I 0.814
BRADI1G03020 Brachypodium distachyon BRADI1G03020 I 0.812
GSMUA_Achr8G33850_001 Musa acuminata GSMUA_Achr8G33850_001 N 0.812
GSMUA_Achr2G16730_001 Musa acuminata GSMUA_Achr2G16730_001 I 0.811
Lus10029863.g Linum usitatissimum Lus10029863.g N 0.811
MDP0000309902 Malus domestica MDP0000309902 I 0.810
PGSC0003DMG400002337 Solanum tuberosum PGSC0003DMG400002337 I 0.805